Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01228 ATGTCAGCCAACATGGCAGCAGAAAATCTTGAAGCAATAGTTGTTGTAGATTGTCCAACAGAGTTTCGTGAATCAACAATGAGGGTTGATGCTTTATCAAAAGCAAGTCATCTTAAGTTGCTCACATTTTTAAATGTGAATTTTTCCGGATGCCTTAATTATCTTTCCAGTGAATTAAGATATCTTTCTTGGAATAAATATCCTTGTGAGTGTTTGCCACCAAGTTTTCAGCCAGACAAACTTGTTGAGTTGTTCCTATGTCGAAGCAATCTCAAACAACTATGGGAAGGAACAAAGGCTCTACACAATTTGAAACATTTGAATATCTCTCACTCCAAAAATCTTTTCAAAATGCCAGATTTTGGGCAGGCCTTAAATCTTGAAACATTAAATCTTGAAGGATGTATACAACTCAGGCAGATTGATCCATCCATTGGTCTACTAAAAAAACTTATTCTTGTGAATTTGAGAAACTGCATAAGTTTAATCAAGTTACCACATTTTGGAGAGGGCCTAAATCTTGAAATTTTAGATCTTGAAGGATGTATACAACTTAGGAAGATCCATCCATCCGTGGGGCTTCTAAGGAAACTTAGTGTTTTGAATTTGAAAGACTGCAAAAATTTAGTAAGCTTACCCAACAACATATTGGGTGTTAATTCTCTTGAACATCTTAGTCTCTCTGGCTGTTCAAAACTTAATGATATCCTATTCTTCGATGAGCCAAGGGATGAGGAGCATATAAAGAAGCTTTGTATAGGTGAAGCTCCTATTCATTCCCATATAACAATTTAA 795 0.3547 MSANMAAENLEAIVVVDCPTEFRESTMRVDALSKASHLKLLTFLNVNFSGCLNYLSSELRYLSWNKYPCECLPPSFQPDKLVELFLCRSNLKQLWEGTKALHNLKHLNISHSKNLFKMPDFGQALNLETLNLEGCIQLRQIDPSIGLLKKLILVNLRNCISLIKLPHFGEGLNLEILDLEGCIQLRKIHPSVGLLRKLSVLNLKDCKNLVSLPNNILGVNSLEHLSLSGCSKLNDILFFDEPRDEEHIKKLCIGEAPIHSHITI 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01228 264 Gene3D Ribonuclease Inhibitor 6 256 IPR032675 -
Pumo5g01228 264 Pfam Leucine Rich Repeat 80 99 IPR011713 -
Pumo5g01228 264 SUPERFAMILY L domain-like 29 252 - -
Pumo5g01228 264 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 32 167 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01228 Pumo-Chr5 28913091 28914149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01228 45 230 WRKY Transcription Factor Family AT4G12020 37.850 2.60e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01228 - - ccaj:109792482 329.331