Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01193 ATGGATTCAGAAGATAGCGATGAAGATGTGTTCACGGTTCCAGATATGGAAGCTGCACCAAGTGTTGATTCTGCAGCAACAAATCCAAGTAGTAGTAACGTCACAGATCCACAGCTTCAGGCTGGCTTCCATGGAAAGTGCCGCCGCGGAAGAAACCCGGTAGACAAGGAGCATAGACGCCTAAAGAGAGCTAAAGAGTTGGAAGACAAGAATACCAAGTTAGAAGAGCGTATTTCGACCTTGATCAACGAGAACACCATGCTCCGCAAGGTTCTTATGAACACCAGGCCCAAAGTTGATGAGAGCAATGAAGCGTAG 318 0.4717 MDSEDSDEDVFTVPDMEAAPSVDSAATNPSSSNVTDPQLQAGFHGKCRRGRNPVDKEHRRLKRAKELEDKNTKLEERISTLINENTMLRKVLMNTRPKVDESNEA 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01193 105 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 63 102 IPR044280 GO:0000981|GO:0045944
Pumo5g01193 105 Coils Coil 57 84 - -
Pumo5g01193 105 MobiDBLite consensus disorder prediction 23 39 - -
Pumo5g01193 105 MobiDBLite consensus disorder prediction 1 68 - -
Pumo5g01193 105 Gene3D Single helix bin 61 94 - -
Pumo5g01193 105 MobiDBLite consensus disorder prediction 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01193 Pumo-Chr5 26920755 26925554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01193 34 102 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 45.918 1.05e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01193 K16241 - gmx:778143 135.961