Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01192 ATGGAGGGGAGATATGAGGATGTGAGAGTTGGAGCCAACAGGTATGGAGAGAGGCAACCAATAGGAACAGCTGCACAGACACAACAAGATGGCAAAGACTACAGAGAGGCACCACCAGCTCCATTGTTTGAGCCTAGAGAGATAACCTCATGGTCTTTCTACAGAGCAGGCATAGCAGAATTTGTGGCCACATTCTTGTTTCTTTATGTCACTGTTTTGACAGTGATGGGGGTTGCAAAATCTCCCAGCAAGTGCTCCACAGTTGGTGTCCAAGGCATTGCTTGGTCATTTGGTGGAATGATCTTTGCCCTTGTCTATTGCACTGCTGGTATCTCAGGGGGTCACATTAACCCAGCTGTGACATTTGGGTTGTTCTTGGCACGCAAGTTATCTCTCACTAGGACAGTGTTCTACATGATCATGCAGTGCTTGGGAGCTATATGTGGTGCTGCTGTGGTCAAGGGCTTCCAATCAAACCAATATGAGAGGCTTGGTGGTGGTGCCAACACTCTCAGTAAAGGATACTCCAAAGGTGATGGCCTTGGAGCAGAGATTGTTGGCACATTTATTCTTGTTTACACCGTTTTCTCTGCTACAGATGCCAAGAGAAATGCTAGAGACTCTCATGTTCCTATTTTGGCTCCATTGCCTATCGGTTTTGCTGTCTTTCTGGTGCATTTAGCTACAATTCCTATCACTGGGACTGGCATCAACCCTGCTAGAAGTTTAGGTGCAGCCCTTGTATACAACAAGGGACCAAGCTTGGGATAA 771 0.4682 MEGRYEDVRVGANRYGERQPIGTAAQTQQDGKDYREAPPAPLFEPREITSWSFYRAGIAEFVATFLFLYVTVLTVMGVAKSPSKCSTVGVQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRTVFYMIMQCLGAICGAAVVKGFQSNQYERLGGGANTLSKGYSKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALVYNKGPSLG 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01192 256 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 13 251 IPR034294 -
Pumo5g01192 256 FunFam Probable aquaporin PIP1-2 40 255 - -
Pumo5g01192 256 PRINTS Major intrinsic protein family signature 97 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo5g01192 256 PRINTS Major intrinsic protein family signature 247 256 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo5g01192 256 PRINTS Major intrinsic protein family signature 134 153 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo5g01192 256 PRINTS Major intrinsic protein family signature 219 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo5g01192 256 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo5g01192 256 PRINTS Major intrinsic protein family signature 183 201 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo5g01192 256 MobiDBLite consensus disorder prediction 1 36 - -
Pumo5g01192 256 Gene3D Glycerol uptake facilitator protein. 40 256 IPR023271 -
Pumo5g01192 256 Pfam Major intrinsic protein 47 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo5g01192 256 NCBIfam MIP family channel protein 59 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pumo5g01192 256 SUPERFAMILY Aquaporin-like 46 250 IPR023271 -
Pumo5g01192 256 ProSitePatterns MIP family signature. 115 123 IPR022357 -
Pumo5g01192 256 CDD MIP 55 251 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01192 Pumo-Chr5 26671855 26674645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01192 1 251 Major Intrinsic Protein MIP AT2G45960 81.673 1.11e-155 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01192 K09872 - gmx:100809467 490.73