Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01174 ATGGCGCCACCCATCGCGGCGTACCTCACGGCCTTCGCCCTCCTCGTCACCGCCGTCTCCGCCGCCGAAACCGGTTACCACAACCACACTGTCGGCGGCGCCGCCGGGTGGTCCTTCAACTCCACCACCAACACACCCGCCACCAACTACTCTTCTTGGGCTTCAAATCAAACCTTCGACCTTGGCGATTATCTCATTTTCAATACGAACTCGAATCAAACGGTGGTTCAAACTTACAATAAGACGACCTATCTGAACTGTACCGCCGACGATTCCGACAACGGCACCTTCGTGTACGGCGGCGGAAACAGTCGTTTCGGCGAAGCGTTGACCATTGCGGTGCCGTTGACCATAGTTGGACCGAACTACTTCTTCTCCGACGCCAGCGACGGCGTGCAGTGCCAGCGCGGCTTGGCCTTCGAGATCGACGTCCAGCGCGGCCTCGGCTTGCCGCCGAGTCTCAACCAGCCGCCGCCGCCGCCGTACCAGGAGCCGCCAGGTCCCGACGCTGCTCAGTCTCCGCCGATCACGGTGGCGCAGTCTCCCAGCGGCGGCACGTTCTCCAGCCGTGCTGACGCGCGCGTCGCGGTTTACGGCTTCGCTGCGGCGTTGTTGCTGCTGCTGCAGCTTCAGTGA 636 0.6242 MAPPIAAYLTAFALLVTAVSAAETGYHNHTVGGAAGWSFNSTTNTPATNYSSWASNQTFDLGDYLIFNTNSNQTVVQTYNKTTYLNCTADDSDNGTFVYGGGNSRFGEALTIAVPLTIVGPNYFFSDASDGVQCQRGLAFEIDVQRGLGLPPSLNQPPPPPYQEPPGPDAAQSPPITVAQSPSGGTFSSRADARVAVYGFAAALLLLLQLQ 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01174 211 PANTHER BLUE COPPER PROTEIN 22 163 IPR039391 GO:0009055
Pumo5g01174 211 FunFam Early nodulin-like protein 18 26 147 - -
Pumo5g01174 211 MobiDBLite consensus disorder prediction 152 172 - -
Pumo5g01174 211 Pfam Plastocyanin-like domain 44 137 IPR003245 GO:0009055
Pumo5g01174 211 SUPERFAMILY Cupredoxins 27 144 IPR008972 -
Pumo5g01174 211 ProSiteProfiles Phytocyanin domain profile. 27 146 IPR003245 GO:0009055
Pumo5g01174 211 MobiDBLite consensus disorder prediction 149 185 - -
Pumo5g01174 211 Gene3D - 26 146 IPR008972 -
Pumo5g01174 211 CDD Phytocyanin 27 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01174 Pumo-Chr5 26355026 26356167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01174 1 179 Phytocyanin Superfamily AT1G08500 37.500 2.70e-30 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01174 - - gmx:100783106 340.502