Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01171 ATGGAAGCAGAAGGCCAGTACTGGCAGATTTCAGAGAGAGAGATACGCTGGTCAGTGGTGTTCATAGTGGCGGCATGGAGCATCATAATATTATTATACGTCAAGCTGTGGTTTAGGCCTCAAAGGATCCGATCCGTGCTTCAGAAGCAAGGCATCAATGGACCAAGGCCTTCCTTTCCCTTTGGCAACATTTCTGAGATGCAACAACTCCACCAACCTCCTCCTGTTTCTCTTGAAGCCTTAGATGAATGGGTTTATTCCCTCTTCCCATATTTCCATACATGGAGGCAACGCTATGGTCCAATGTTCCTGTACTCCACTGGAAGCAAACAACATCTATATGTGGAGATACCCGAATTAATAAAATGGATAGGTCTGAACAAGTCCTTGGATCTAGGCCGGTCATTGCATCTAACCAAAATCTTGAAGCCTTTGCTGGGTGACGGCATCATTATGTCTAATGGACTACAGTGGGCCTTCCAAAGGAATCTACTTGCTCGTGAGTTTTTCCAGAGCAAAATTAAGAATTGGGTGGATTTAATGGAAGAATCTACGATGGCAATTATCAAAAAATGGGAGAGCCATATAACAGAAAGTGAAGAGGGGATTGCAGAGTTGGTGATTGATGGAGATATGAGAGCTCTAACAGCGGATGTCATTTCAAAAGCTTGTTTTGGTAGCACTTATGCTCAAGGCAATTTAATTTTTGCAAAATTGGCCACTATGCAAACGGCACTAGCAAAGCGTATTATTCTATTTGGATTTCTAAACCTAAGGTTTCTTCCCACCAAGGAAAACATAGAGTTATGGAAGTTGCAGAAAGAAGTGGAAACGATGATACTAAAAGTGATCAAAGACCGTGAAGCAGAAAACCAAAAGAGTAACACACATGGGAATCAAAAGGATCTATTACAAATAATACTAGAAGGTGCTGCCAGTGCCACCACTGATAGTAGTGGAAAGGGTATTTTTGGGCCCCGGTATAACATAAACCAGTTGATTCTAGACATCTGCAAAAATATGTACTTTGCAGGCTCTGAGACCAGTGCTCTTGCAATTATTTGGACACTGCTGCTACTTACCTTACATCCTGACTGGCAACAACGTGTTAGATATGAGATTATGGAGACCTACAATAACATGATGCCTCATTCCTTTCATGACATGGACAAACTTGGAAAGTTGAAAGCACTAACAATGGTGATTCAAGAGAGTGTGCGTCTTTATGGGCCTGCAGTTACAGCCTCAAGGGAAGTGTTGGCGGATATGAAGTTAGGGGAACATGTGCTGCCTAAAGGCATCAACATATGGTTGTTCTTGCCGGCATTGCACCGTGACCCTGATAACTGGGGACCAGATGCTAGGGAGTTCAAGCCTGAAAGGTTTGATGGCGGTGTTTCTGTAGCCTGTAAATATCCCCAATCTTATATACCATTTGGCCTTGGGAGTCGAATATGCATAGGCCAAAACTTTGCCCTGCTTGAAATCAAGGTAGCACTCTGCCTTCTACTATACAACTTCTCCTTTGCTGTTTCACCAAACTATCGCCATTGCCCCGTCTATAGAATGCTCTTAGTGCCAAAATATGGTCTCAGGCTTCTTGTTAGCAAGGTTCACAAGACCGGGCCATAA 1632 0.432 MEAEGQYWQISEREIRWSVVFIVAAWSIIILLYVKLWFRPQRIRSVLQKQGINGPRPSFPFGNISEMQQLHQPPPVSLEALDEWVYSLFPYFHTWRQRYGPMFLYSTGSKQHLYVEIPELIKWIGLNKSLDLGRSLHLTKILKPLLGDGIIMSNGLQWAFQRNLLAREFFQSKIKNWVDLMEESTMAIIKKWESHITESEEGIAELVIDGDMRALTADVISKACFGSTYAQGNLIFAKLATMQTALAKRIILFGFLNLRFLPTKENIELWKLQKEVETMILKVIKDREAENQKSNTHGNQKDLLQIILEGAASATTDSSGKGIFGPRYNINQLILDICKNMYFAGSETSALAIIWTLLLLTLHPDWQQRVRYEIMETYNNMMPHSFHDMDKLGKLKALTMVIQESVRLYGPAVTASREVLADMKLGEHVLPKGINIWLFLPALHRDPDNWGPDAREFKPERFDGGVSVACKYPQSYIPFGLGSRICIGQNFALLEIKVALCLLLYNFSFAVSPNYRHCPVYRMLLVPKYGLRLLVSKVHKTGP 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01171 543 Pfam Cytochrome P450 90 533 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01171 543 PRINTS P450 superfamily signature 344 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01171 543 PRINTS P450 superfamily signature 400 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01171 543 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01171 543 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01171 543 SUPERFAMILY Cytochrome P450 84 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01171 543 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
Pumo5g01171 543 PRINTS E-class P450 group I signature 353 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01171 543 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01171 543 PRINTS E-class P450 group I signature 215 233 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01171 543 PRINTS E-class P450 group I signature 333 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01171 543 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01171 543 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01171 543 Gene3D Cytochrome P450 37 541 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo5g01171 543 PANTHER CYTOCHROME P450 FAMILY MEMBER 30 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01171 Pumo-Chr5 26220388 26318656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01171 120 535 Cytochrome P450 AT5G24900 44.048 4.97e-129 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01171 - - gmx:100801472 895.19