Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01158 ATGGCGACTAATGCAACAAAGTCCACCACGACGACGTCGTCACAGGAGAAACGACACCGTTCGATCTTCGAAGTTCCACCGAACTTCTTCGACTCTTGTCGCCTTCTCCCTTCCCCTCACTCATCCGTTTCCGACCACCACAGCGTAAGCCGAACCCAAACCCTCGAACCATCCTCAAACGACGACGTCGTTTTGGATGCCCCTCAAAACGCCGTCGTTTCCGCCCCTAGGTGGACCTGCAATACCTGCAAGACTCAATTCGATTCCCTTCAAGACCAGCGTTCCCATTTCAAATCCGACATTCATCGATTCAATGTGAAGTTGACAATTGCTGGGAAGAATATTGTGAAGGAAGAAGATTTCGAGGTGCTGACATCTGAATTTGTTAAAGACTATGATGTGTCAAGTATATCGGGATCAGAAAGTGATGATGATAGTGAAACTGAGTCTCAGAGTCATAGTCTAGTGCTTGACAAATCGAGTGAAAGTTTTAAACAGAAACTATTCTTCCATCTTCAAACAGGGCAGAGAGTTTCTGTCTGGAAGTGCTTGATTATGAATGTGACTGAAAACGTATTGTATGATAATGAAAAGGCAGAGAACGAAGTGGTTGAGAAGTTGAAATATTTGACTGCTGAACCCAGAGACAATACCCATTTGAGGATTGTTCTGCTTGCGTCCGGTGGGCACTTTGCAGGTTGTGTCTTTGATGGTGATGCTGTTGTGGCTCACAAGACATTTCACAGATATGTTGTAAGGGCCAAGGCAGGAAAAAAACAATCATCTAAAGATGCTTCTGGCAGGGCAGCACATTCTGCTGGGGCTTCACTTCGTCGTTATAATGAACTTGCATTAAAGAAGGAAGTTCATGAACTGCTCACTGCTTGGAAACCTTATTTTGATGCTTCCAATTGCATTTTTATACATTCACCTTCAAGTAGTCGCCAACTGCTTTATGATGGAGAAAGACCATACTTTACCAATCAACAGTGTGCTATTAGAAATATTGCTTTGACTGTTCGGAGGCCTACTTTCAGGGAAGCAAAGCGTGTATATAGCCAGTTGACCCAGGTAACCTATGAAGCAGATGAGAAGGAAGTTTTACAAAGCAACCAAGAGGATTCGGTATCAATTCACATTTCTAAAATAAATGTCAGTCCAACCTCCATCAAAGGGGACATGGTTGAGTTGGATGACAAAGATAAAGCTGAAGCTTGTTCTAGTAAACAAAATGATGAACTCCCAATTTCGAGTAATGGAGAAAGTGAGGATGAGCTATCTGGTAAATCAACTCCTTTACATCAGGCAGCACAATCTGGTGACACTCTAAAGGTTTTAGAGCTCCTGGAACAGGGCTTGGATCCTTGCATCACAGATGAAAGGGGGAGGACCCCATATATGTTGGCACATGACAAAGAAGTGAGGAATACTTTCAGAAGGTTTATGGCGTCAAATCTTGACAAATGGGATTGGCATGCTGCAAAAGTGCCCAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCTGCTAAGCAGGCAGAAAAAGATGCTAAGAGAAAAGCTAGAGCAAAAGAATTAAAGAAGTTGCGTAAAGCAAAAGAAAAGAAGGTTCAGGCTGAAGCCAGCTTGCCTAAGAATGATTCCAAAACTGTAGAGAAGCAAGTAACTGCTTCAACATCGATTAAGGGACAATCTCAACTAAAAAGTGGCGTGCAATTATCCAAAGAGGACCAAATAAGAATTGCACAGGCTGCTGAAAGAGAAAAGAGAGCAGCTGCTGCTGAGAGGAGAATAGCTGCCCTCAAAATTCAAGCTAATAGTGCAACCACTGCACCTAGCATGTCAGAACCTAAAAGTGGATTAGCTGGTGACATTTACTGTTCCTATTGTAATTCATCACTTGCTGGTAAAGTTCCCTTCCACAGGTATAACTACAAATACTGCAGCACATCATGCATGCATGTACACAGGGAGATCCTAGAAGATCAATGA 1992 0.4292 MATNATKSTTTTSSQEKRHRSIFEVPPNFFDSCRLLPSPHSSVSDHHSVSRTQTLEPSSNDDVVLDAPQNAVVSAPRWTCNTCKTQFDSLQDQRSHFKSDIHRFNVKLTIAGKNIVKEEDFEVLTSEFVKDYDVSSISGSESDDDSETESQSHSLVLDKSSESFKQKLFFHLQTGQRVSVWKCLIMNVTENVLYDNEKAENEVVEKLKYLTAEPRDNTHLRIVLLASGGHFAGCVFDGDAVVAHKTFHRYVVRAKAGKKQSSKDASGRAAHSAGASLRRYNELALKKEVHELLTAWKPYFDASNCIFIHSPSSSRQLLYDGERPYFTNQQCAIRNIALTVRRPTFREAKRVYSQLTQVTYEADEKEVLQSNQEDSVSIHISKINVSPTSIKGDMVELDDKDKAEACSSKQNDELPISSNGESEDELSGKSTPLHQAAQSGDTLKVLELLEQGLDPCITDERGRTPYMLAHDKEVRNTFRRFMASNLDKWDWHAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKKVQAEASLPKNDSKTVEKQVTASTSIKGQSQLKSGVQLSKEDQIRIAQAAEREKRAAAAERRIAALKIQANSATTAPSMSEPKSGLAGDIYCSYCNSSLAGKVPFHRYNYKYCSTSCMHVHREILEDQ 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01158 663 MobiDBLite consensus disorder prediction 41 62 - -
Pumo5g01158 663 SUPERFAMILY beta-beta-alpha zinc fingers 76 109 IPR036236 -
Pumo5g01158 663 MobiDBLite consensus disorder prediction 1 20 - -
Pumo5g01158 663 Coils Coil 504 542 - -
Pumo5g01158 663 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 12 662 IPR047139 -
Pumo5g01158 663 Pfam Bacteroidetes VLRF1 release factor 222 360 IPR041175 -
Pumo5g01158 663 SUPERFAMILY Ankyrin repeat 430 483 IPR036770 -
Pumo5g01158 663 MobiDBLite consensus disorder prediction 402 434 - -
Pumo5g01158 663 Coils Coil 575 611 - -
Pumo5g01158 663 MobiDBLite consensus disorder prediction 543 569 - -
Pumo5g01158 663 MobiDBLite consensus disorder prediction 410 434 - -
Pumo5g01158 663 MobiDBLite consensus disorder prediction 529 569 - -
Pumo5g01158 663 Gene3D - 396 494 IPR036770 -
Pumo5g01158 663 Pfam Vms1-associating treble clef domain 626 659 IPR041540 -
Pumo5g01158 663 ProSiteProfiles Ankyrin repeat profile. 428 460 IPR002110 GO:0005515
Pumo5g01158 663 ProSitePatterns Zinc finger C2H2 type domain signature. 80 102 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01158 17 610 C2H2 Transcription Factor Family AT1G01930 52.572 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01158 K26089 - gmx:100527709 1096.65