Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01153 ATGGCGTCGAACCGTAACGGCGTCCAAAGGGGAAGCGCCAAGTTCGATCGCCCTCTCAAGCCCCGCCCCCGCCCCTCCTCCCCCTCGCCGGGATCCGCCCTTCGCCGCCCCAACGCCGCCGCCAGAAACGGCGACGCCGTACCTGGAAGAGTTCGAGTGGCTGTAAGATTGAGACCACGGAATGCTGAAGAAATGATGGCGGATGCCGATTTTGCTGACTGTGTTGAATTACAACCAGAGCTTAAAAGACTGAAACTTCGTAGAAACAATTGGGATTCAGACACTTATGAGTTTGATGAGGTGCTTACCGAATTTGCATCACAGAAACGTGTCTATGAAGTTGTGGCTAAGCCAGTTGTGGAGAGTGTTCTTGATGGTTATAATGGGACTGTGATGGCTTATGGTCAAACTGGAACTGGGAAAACTTTTACACTTGGACGACTGGGGGAAGTAGACGCCTCTGACCGTGGTATCATGGTTCGTTCCATGGAGGATATTTTTGCTGACTTATCACCAGACACCGATTCTGTCACTGTGTCTTATCTGCAGCTTTACATGGAGACTCTCCAGGACTTGCTGAATCCAGCAAATGATAATATTCCTATAGTGGAAGACCCAAGAAGTGGTGATGTATCTATGCCTGGGGCAACTCTAGTAGAAATCACAGACCAACATACTTTTTTGGAGTTGTTAAGAGTAGGGGAAGCTAATCGAGTCGCTGCTAACACAAAATTGAATACTGAATCTTCTCGCAGTCATGCTATTCTAATGGTTCATATTAAGAGGTCTGTCTTGGAAAATGAAGATATTGTGTCTAGTCAAAATGGTGATGCCTCTCATTTGACTAAACCTTCAAAACCACTTGTTCGGAAGAGCAAGTTGGTTGTGGTAGACTTGGCAGGTTCAGAACGTGTCCATAAGTCAGGAAGTGAAGGGCACATGCTAGAGGAAGCTAAATCTATCAATCTTTCACTTAGTTCATTGGGAAAATGTATTAATGCTCTAGCAGAGAACAATGCTCATGTTCCATTTCGTGATTCGAAGCTTACCAGGATGCTTCGAGATTCTTTTGGAGGCACAGCTAGGACTTCATTGATCGTGACTATTGGCCCATCTCCTCGTCATCGAGGAGAGACTTCTAGTACCATATTGTTTGGCCAAAGGGCTATGAAAGTTGAGAATATGCTGAAAATAAAGGAAGAATTTGATTATAAAAGCTTGTCTCGAAAGCTTGAGGTACAATTAGATAAGCTTATTGCAGAAAATGAAAGACAGCAGAAAGCTTTTGAGGATGAAGTTGAAAAAGTAAATTTGGGGGCTCAATGTCGTATTGCTGAGGTTGAGAGGAACTTTGCAGATGCGTTAGAGAAAGAGAGACTGAAATGCCAGATGGAGTACATGGAATTGGTAAAGGAGCTGGAGCAGAAGTTGGTGTTGAATCAAGAAAGAAATGACTGCAATAGTTTTGTGGCTGATAATGGAGAGGGGCCTGCATCATCTTCTGCAGATGAAGTTGCTGAGGTCAAAATGCTGCTTGAAACGGAAAGAAATCGGAGGAAGGCAGCTGAAGAAGGGGTAGAACATCTAAAAAGTCAGCTGGGGAAACATATGCAAGCAGAGACAGGAGATGTGGAGATTATAAAGATTCGCAACATCCTGGAGGACGAGGCTAATCAGAAAAAAAGACTTGAAGAAGAAATCATAATACTAAGGAGTCAATTATTGCAATTGAACTTTGAAGCTGACCAGATGAGAAGGTGTTTGGAAAATGGAAGCTCTGGGAGCACATTTTCTGCCATGGATTCCTCCACGACTCAAGTTAGGCATTCCCAATTCAAGGACACCACAAATGGTCAAAAGTCATCTGTTGCTACACTCTTTGAGCAAGTTGGATTGCAAAAGATTTTGTCATTGCTGGAGTCAGATGATGCCAATGTACGAATTCATGCCGTGAAAGTGGTGGCCAACCTAGCAGCTGAAGAGGCTAATCAAAAGAGAATTGTTGAAGCTGGTGGTCTTACTTCCTTGCTGATGCTTCTTCGAAGATACGAGGATGAAACTGTTCGCAGAGTAGCTGCTGGGGCAATTGCCAATCTTGCTATGAATGAAGCAAACCAAGAACTTATTATGGCAGAAGGAGGAATTACTCTGTTATCAATGACTGCATCTGATGCTGAAGATCCTCAAACTCTTCGAATGGTTGCCGGAGCAATTGCTAACCTATGTGGAAATGATAGAATATTGATGACTCTGAGATCTCAGGGAGGTATTAAGGCTTTACTGGGAATTGTAAGATGTGGACATCCCGATGTTCTTTCCCAAGTTGCGCGAGGAATTGCTAACTTTGCAAAATGCGAGTCTCGAGCTTCTAATCAAGGGATAGAAAGTGGCAGATCCTTTTTGATAGAAGATGGCGCTCTTCCGTGGATAGTACAAAATGCTAACAATGAAGCTGCACCAATCAGGCGTCACATTGAGCTTGCACTCTGCCACTTGGCACAGCATGAAGTGAATGCAAAGGACTTGATTAGTGGTGGTGCTCTTTGGGAGCTTGTCCGGATTTCACGCGATTGTTCACGGGAGGACATACGAAATCTTGCTCGTCGGACTCTCAGTTCCGTCTCAACATTCAAATCTGAATTACGACGGTTGCGTATAGATTATTGA 2667 0.4428 MASNRNGVQRGSAKFDRPLKPRPRPSSPSPGSALRRPNAAARNGDAVPGRVRVAVRLRPRNAEEMMADADFADCVELQPELKRLKLRRNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGEVDASDRGIMVRSMEDIFADLSPDTDSVTVSYLQLYMETLQDLLNPANDNIPIVEDPRSGDVSMPGATLVEITDQHTFLELLRVGEANRVAANTKLNTESSRSHAILMVHIKRSVLENEDIVSSQNGDASHLTKPSKPLVRKSKLVVVDLAGSERVHKSGSEGHMLEEAKSINLSLSSLGKCINALAENNAHVPFRDSKLTRMLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRKLEVQLDKLIAENERQQKAFEDEVEKVNLGAQCRIAEVERNFADALEKERLKCQMEYMELVKELEQKLVLNQERNDCNSFVADNGEGPASSSADEVAEVKMLLETERNRRKAAEEGVEHLKSQLGKHMQAETGDVEIIKIRNILEDEANQKKRLEEEIIILRSQLLQLNFEADQMRRCLENGSSGSTFSAMDSSTTQVRHSQFKDTTNGQKSSVATLFEQVGLQKILSLLESDDANVRIHAVKVVANLAAEEANQKRIVEAGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDRILMTLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASNQGIESGRSFLIEDGALPWIVQNANNEAAPIRRHIELALCHLAQHEVNAKDLISGGALWELVRISRDCSREDIRNLARRTLSSVSTFKSELRRLRIDY 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01153 888 CDD KISc 50 390 - -
Pumo5g01153 888 MobiDBLite consensus disorder prediction 1 47 - -
Pumo5g01153 888 PRINTS Kinesin heavy chain signature 342 363 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g01153 888 PRINTS Kinesin heavy chain signature 126 147 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g01153 888 PRINTS Kinesin heavy chain signature 293 311 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g01153 888 FunFam Kinesin-like protein 42 422 - -
Pumo5g01153 888 ProSitePatterns Kinesin motor domain signature. 292 303 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo5g01153 888 PANTHER CENTROMERE PROTEIN E 50 606 IPR027640 GO:0003777|GO:0007018
Pumo5g01153 888 SMART kinesin_4 48 400 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g01153 888 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 630 672 IPR000225 GO:0005515
Pumo5g01153 888 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 427 IPR027417 -
Pumo5g01153 888 Coils Coil 408 435 - -
Pumo5g01153 888 SMART arm_5 744 784 IPR000225 GO:0005515
Pumo5g01153 888 SMART arm_5 620 659 IPR000225 GO:0005515
Pumo5g01153 888 SMART arm_5 702 743 IPR000225 GO:0005515
Pumo5g01153 888 SMART arm_5 834 876 IPR000225 GO:0005515
Pumo5g01153 888 SMART arm_5 660 701 IPR000225 GO:0005515
Pumo5g01153 888 Gene3D - 434 880 IPR011989 -
Pumo5g01153 888 SUPERFAMILY ARM repeat 623 881 IPR016024 -
Pumo5g01153 888 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 671 714 IPR000225 GO:0005515
Pumo5g01153 888 Coils Coil 452 472 - -
Pumo5g01153 888 FunFam Kinesin-like protein 600 876 - -
Pumo5g01153 888 Pfam Kinesin motor domain 56 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g01153 888 Coils Coil 512 532 - -
Pumo5g01153 888 Pfam Armadillo/beta-catenin-like repeat 663 700 IPR000225 GO:0005515
Pumo5g01153 888 Coils Coil 546 580 - -
Pumo5g01153 888 ProSiteProfiles Kinesin motor domain profile. 50 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo5g01153 888 Gene3D Kinesin motor domain 43 422 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01153 Pumo-Chr5 25824629 25835774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01153 49 425 Calmodulin-binding Proteins AT5G65930 35.025 1.13e-46 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01153 - K10396 gmx:100789455 1634.77