Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo5g01128 | ATGAGAACAAGATTGGCAAAGGTGGATTTGGAGAAGTTTATAAGTGGCTATATGTCTCCAGAGTATGCTATGTTTGGACAATTTTTTTATAGATTAGATGTTTACAGCTTTGGAGTTATGGTTCTTGAGATTGTTTGGAGACATTGGAGGGATGAAACACCATTGAACACATTGGATCCAAAATTAGAAGAAAACTATTCTAACATTGAAGTCATTAAATGCATTCAAATTGGTTTATTATGTGTTCAAGAAAACCCAGATGCTAGACCTTCAATGGTGACAATTGCTTCATATCTCAATGGTCATTCAATTGAGTTGCCATCTCCTAAAGAACCAACATTTTACTTGTACCACAGAATGGATCCAATTGTTGCAAATGAATCAAGTTCGAGGCAATCTACCAACAATTCCATACCATCCTCTATCAATGAGATTTGCGGTGCAGAGAAAACCACTGCCAACAGCACCTATCAGATGAACCTGAGGACCCTCCTCTCTTCCCTATCTTCCAACGCCACCATCAACACATTCTACAACGGCACGGTCGCCGGCAGAAACTCCTCGGACACAGTGTATGGATTGTTCATGTGCAGGGGTGATGTACTCTTACCCTCTCAACTCTGCAGACAGTGCGTGGTAAACGCAACCGAGAGATTATCTTCACCACAGTGTTCGCTGTCCAAAGAGGGTGTGATTTGGTACGACGAGTGCATGGTTCGGTATTCCAACGCCACTTTCTTCTCCACAGTGGACACATCTCCCTCATGGTCCTCGTTTAACGTGGCGAAAATCTCCTCCAACTCAACAAGCTTCACGAGTTTGTTGCCCTACGCCATGAACCTAACTGCACATGAAGCAGCCAATTCTAGTAACAGGTACTCCACAAAGAAAACAAACATTTCTGAGATTCAGACCCTATACTGTCTGGCTCAGTGCACACAAGACCTCTCACCCCAAAACTGCACAACCTGTCTTACTCAAGCAATAGGGAACCTCACACAGCTCAGTAACGGAAAGCAAGGAGGAAGAGTTGCGTTTCCCAGTTGTAACATTAGGTATGAATTGTACCCTTTCTACCGCGCCGCTGATGAGACACCAGAAGCACTCGTTCCTGAAACGAAATATCCACACAGGGATTCAGAATATTCAGAAGATCCTGGCTATATTTCCCACAACTGCTCAACAAACCAATACATGAACGACACTGCTTTCGAATCCGACCTCAGTAACCTCTTCTCTAACTTGTCTTCCAACGCCAACAGTGGCAGTAGATTCAAGATAACAATGGGAACACTGCAGGGCCTCTATGCGTGTCGTGGCGACCTTTCTCCATACTTTTGTGAAGAATGCGTCCGAAACGCAACGCAGAAGATAGCCTCGGAGTGTGGTTTGGCTACGGAGGGTGTAATTTGGTACAACCACTGCTGGCTTCGCTATTCCAATCGGTCCTTGGCCATGGAAACAAGTCCAAGATTTGTGAATTTGAATCTCAGCGACACCGATCCGGTGCAACACTCTGTTGCTAATAAATTATCCACTAAATTAGATGTGATGGCGTACGGCACTGGTGACAACTATCAAACTGGAACATTAAGATTGAATGATTTGCAAACGGTGTATATTCTTGCTCAATGCACAATGGATCTATCTAGCCATGCTTGCACTGTCTGCCTAGAGGATATGATTGGATCAGCAATTCCATGGGCTCGTTTGGGAAGCGTAGGTGGACAAGTTTTGTACCCTAGCTGTATTCTCCGCTTTGAATTGTTCCAGTTTTATGATCTCACGCCCACGACCACACCACCAACTAGTACCCCTCTTCCACCACCACCAGTACCACCAGTTGGACATGAAATTTCCACAATAGAGTCATTGCAATTCAATTTGGACATAATTGAAGCAGCAACAAACAACTTTTCTCACGAGAACAAGATTGGCAAAGGTGGATTCGGAGAAGTTTATAAGGGCATTCTTATAGATGGAAGACCTATAGCCGTAAAGAGGCTCTCAAGAAATTCTAAGCAAGGTGTAGCAGAGTTCAAAAATGAGGTTCTATTAATAGCCAAGCTTCAACATAGAAATCTAGTGGCATTCATAGGATTTTGTCTTGATGACCAAGAGAAAATACTTATCTATGAATACGTTCCAAACAAGAGTCTAGACTACTTCTTATTTGATACCAACCAAGAAAAGGTTTTGAGCTGGTCTGAGCGTCACAAAATCATAGAAGAGATTGCTCGAGGAATTCTATATTTACACAAACATTCTCGACTTAAAGTTATACATCGTGATCTTAAACCTAGTAATGTACTATTAGATGAAAATATGAATCCAAAAATTTCAGATTTTGGTCTTGCTAGAATTGTTGAAATAGATCAACAAGAAGGAAGTACAAACAGAATTATTGGAACATATGGCTATATGTCTCCAGAGTATGCCATGTTTGGACAATTTTCTGAGAAATCAGATGTTTATAGTTTTGGAGTTATGGTTCTTGAGATTGTTAGTGGAAAAAAGAATGTTGGTTCACATAATCCACATCGTGTTGCTGATGGTCTTCTAAAATTTGTTTGGAGACAATGGAGGGATGAAACACCATTGAACACATTGGACCCAAAATTAAAGGAAAATTATTCTAATATTGAAGTCATCAAATGCATTCAAATTGGTTTATTATGTGTTCAAGAAAATCCAGATGCTAGACCTACAATGGTGACAATTGTTTCATATCTTAGTGGTCATTCAATTGACTTGCCATCCCCTGAAGAACCAACGTTTTTCTTGTACCATAGAAAGGATCCAATTATTGCACACAAATCAAGGTTGAGGCTATCTACCAACAATTCCATACCATCCTCTATCAATGAAATGTCTATAAGTGAATTCTATCCTCGATAA | 2898 | 0.4106 | MRTRLAKVDLEKFISGYMSPEYAMFGQFFYRLDVYSFGVMVLEIVWRHWRDETPLNTLDPKLEENYSNIEVIKCIQIGLLCVQENPDARPSMVTIASYLNGHSIELPSPKEPTFYLYHRMDPIVANESSSRQSTNNSIPSSINEICGAEKTTANSTYQMNLRTLLSSLSSNATINTFYNGTVAGRNSSDTVYGLFMCRGDVLLPSQLCRQCVVNATERLSSPQCSLSKEGVIWYDECMVRYSNATFFSTVDTSPSWSSFNVAKISSNSTSFTSLLPYAMNLTAHEAANSSNRYSTKKTNISEIQTLYCLAQCTQDLSPQNCTTCLTQAIGNLTQLSNGKQGGRVAFPSCNIRYELYPFYRAADETPEALVPETKYPHRDSEYSEDPGYISHNCSTNQYMNDTAFESDLSNLFSNLSSNANSGSRFKITMGTLQGLYACRGDLSPYFCEECVRNATQKIASECGLATEGVIWYNHCWLRYSNRSLAMETSPRFVNLNLSDTDPVQHSVANKLSTKLDVMAYGTGDNYQTGTLRLNDLQTVYILAQCTMDLSSHACTVCLEDMIGSAIPWARLGSVGGQVLYPSCILRFELFQFYDLTPTTTPPTSTPLPPPPVPPVGHEISTIESLQFNLDIIEAATNNFSHENKIGKGGFGEVYKGILIDGRPIAVKRLSRNSKQGVAEFKNEVLLIAKLQHRNLVAFIGFCLDDQEKILIYEYVPNKSLDYFLFDTNQEKVLSWSERHKIIEEIARGILYLHKHSRLKVIHRDLKPSNVLLDENMNPKISDFGLARIVEIDQQEGSTNRIIGTYGYMSPEYAMFGQFSEKSDVYSFGVMVLEIVSGKKNVGSHNPHRVADGLLKFVWRQWRDETPLNTLDPKLKENYSNIEVIKCIQIGLLCVQENPDARPTMVTIVSYLSGHSIDLPSPEEPTFFLYHRKDPIIAHKSRLRLSTNNSIPSSINEMSISEFYPR | 965 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo5g01128 | 965 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 | 139 | 245 | - | - | |
Pumo5g01128 | 965 | Gene3D | - | 386 | 483 | IPR038408 | - | |
Pumo5g01128 | 965 | Gene3D | - | 255 | 358 | IPR038408 | - | |
Pumo5g01128 | 965 | Gene3D | - | 139 | 246 | IPR038408 | - | |
Pumo5g01128 | 965 | Gene3D | - | 490 | 592 | IPR038408 | - | |
Pumo5g01128 | 965 | CDD | STKc_IRAK | 645 | 911 | - | - | |
Pumo5g01128 | 965 | Gene3D | Transferase(Phosphotransferase) domain 1 | 715 | 918 | - | - | |
Pumo5g01128 | 965 | Gene3D | Transferase(Phosphotransferase) domain 1 | 11 | 107 | - | - | |
Pumo5g01128 | 965 | SUPERFAMILY | Protein kinase-like (PK-like) | 625 | 942 | IPR011009 | - | |
Pumo5g01128 | 965 | SMART | serkin_6 | 639 | 911 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g01128 | 965 | SUPERFAMILY | Protein kinase-like (PK-like) | 16 | 135 | IPR011009 | - | |
Pumo5g01128 | 965 | ProSiteProfiles | Gnk2-homologous domain profile. | 485 | 592 | IPR002902 | - | |
Pumo5g01128 | 965 | ProSiteProfiles | Gnk2-homologous domain profile. | 139 | 246 | IPR002902 | - | |
Pumo5g01128 | 965 | Pfam | Protein kinase domain | 640 | 908 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g01128 | 965 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 193 | 945 | - | - | |
Pumo5g01128 | 965 | Gene3D | Phosphorylase Kinase; domain 1 | 615 | 714 | - | - | |
Pumo5g01128 | 965 | Pfam | Salt stress response/antifungal | 267 | 356 | IPR002902 | - | |
Pumo5g01128 | 965 | Pfam | Salt stress response/antifungal | 526 | 588 | IPR002902 | - | |
Pumo5g01128 | 965 | Pfam | Salt stress response/antifungal | 146 | 243 | IPR002902 | - | |
Pumo5g01128 | 965 | Pfam | Salt stress response/antifungal | 393 | 481 | IPR002902 | - | |
Pumo5g01128 | 965 | ProSitePatterns | Protein kinases ATP-binding region signature. | 645 | 667 | IPR017441 | GO:0005524 | |
Pumo5g01128 | 965 | FunFam | Cysteine-rich receptor-like protein kinase 25 | 254 | 358 | - | - | |
Pumo5g01128 | 965 | ProSiteProfiles | Protein kinase domain profile. | 639 | 926 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g01128 | 965 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 760 | 772 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo5g01128 | 965 | FunFam | cysteine-rich receptor-like protein kinase 10 | 715 | 918 | - | - | |
Pumo5g01128 | 965 | ProSiteProfiles | Gnk2-homologous domain profile. | 252 | 358 | IPR002902 | - | |
Pumo5g01128 | 965 | ProSiteProfiles | Gnk2-homologous domain profile. | 386 | 484 | IPR002902 | - | |
Pumo5g01128 | 965 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 | 610 | 714 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo5g01128 | Pumo-Chr5 | 24707040 | 24723358 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo5g01128 | 383 | 965 | Receptor kinase-like Gene Family | AT4G05200 | 41.437 | 2.58e-161 | 488 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Pumo5g01128 | Pkinase | 6.7e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo5g01128 | - | - | gsj:114397380 | 1202.96 |