Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01107 ATGTGGCTGGGGAGCGAGATACGCATACCACCACCACCACCATCATCATCTACATACATGCATCATCAGTCATCAGCTGATAACTATCTGAGTGTTGGATTGTGTTGGGTGGACAAGGCTGACACACAGCATCTCTCTCACATTCTCAAAATGCTAACCCTCAATCTCAATGCTATCTCTTCTTCGTTCTCAGTTGTTCCGTTTCATGCCAATTATCCACTGTCTACTCAAACTCAATTATTAGTTCCTTCCAATCTTAATTACTCCTTTGCTACAACAGCAACCAGAAAGTTCAAGTCTTTTCAGCTCAAGGCTGGATTTTGGGAATCAATTAAATCTGGGTTGATGAAGAATAACTCAACGCAAGTCATTGATCCACCCTCCACAGATGAAGAAGATGAAGAACCTCTGCCTCAAGAGTTTGTCCTTGTGGAAAAGACAGAACCCGATGGGACAATTGAGCAAATAATATTCTCTTCAGGTGGAGATATTGATGTTTATGATCTTCAAGCCCTCTGTGACAAGGTAGGGTGGCCACGTAGACCATTGTCAAAATTAGCCGCTGCTTTGAAAAATAGCTACATAGTGGCCTCACTGCATTCTGTAAGAAAGTCACCTGGGTCAGAGGGGAATGAACAGAAGAGATTAATTGGCATGGCCCGTGCTACGTCTGACCATGCCTTCAATGCCACAATTTGGGATGTCCTAGTTGATCCTGGCTACCAGGGCCAAGGTCTTGGTAAAGCTCTTATAGAGAAACTGATTCGAGCTCTTCTGCAAAGGGACATTGGCAATATAACTCTGTTTGCAGATAGTCAAGTTGTGGAATTTTATCGCAATTTAGGCTTTGAAGCTGACCCAGAGGGCATAAAAGGCATGTTTTGGTACCCGAATCGCTAA 900 0.4356 MWLGSEIRIPPPPPSSSTYMHHQSSADNYLSVGLCWVDKADTQHLSHILKMLTLNLNAISSSFSVVPFHANYPLSTQTQLLVPSNLNYSFATTATRKFKSFQLKAGFWESIKSGLMKNNSTQVIDPPSTDEEDEEPLPQEFVLVEKTEPDGTIEQIIFSSGGDIDVYDLQALCDKVGWPRRPLSKLAAALKNSYIVASLHSVRKSPGSEGNEQKRLIGMARATSDHAFNATIWDVLVDPGYQGQGLGKALIEKLIRALLQRDIGNITLFADSQVVEFYRNLGFEADPEGIKGMFWYPNR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01107 299 Pfam Acetyltransferase (GNAT) family 166 283 IPR000182 GO:0016747
Pumo5g01107 299 FunFam Putative acetyltransferase NSI 160 296 - -
Pumo5g01107 299 MobiDBLite consensus disorder prediction 1 20 - -
Pumo5g01107 299 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 165 288 IPR016181 -
Pumo5g01107 299 Gene3D - 160 296 - -
Pumo5g01107 299 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 156 299 IPR000182 GO:0016747
Pumo5g01107 299 CDD NAT_SF 212 268 - -
Pumo5g01107 299 PANTHER ACYL-COA N-ACYLTRANSFERASE 62 297 IPR045039 GO:0008080
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01107 Pumo-Chr5 24005424 24010759 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pumo5g01107 Acetyltransf_1 3.8e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01107 K22450 - gmx:100799333 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01107 5 24005424 24010759 Pumo5g01107 5 24005424 24010759 ECH