Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01101 ATGATGCTACAGTCCTACTTTACCACATTACCAATTTTCCTACTCCTGCTTGTGTTTCCTCAAACTAAAGCTGATCTACATTCAGAAAAGCAAGCCCTCCTTGATTTTGCTGCTGCTCTTCATCATGGTCCAAAAGTCAATTGGAACTCTAGTACCTCAATCTGCACTTCATGGGTTGGAGTTACATGCAACCATGATGGCTCCCATGTTCTTTCTGTGAGGCTTCCAGGTGTCGGATTGCGCGGTTCTCTCCCACCAAACACACTTGGTAAGCTAAATGGCCTCATTAGTCTCAGTCTTAGGTCCAACAGCTTGAGGGGGAACCTTCCAACTGATCTACTTTCCCTTCCTTCTCTGCGCTTTATATATCTCCAACACAACAACTTCTCAGGTGAAATTCCCGATTCTCTGCCACCCCAGCTTATCTTTCTTGATTTGTCCCATAACTCTTTCACAGGGAAAATTCCAGCCTCAATCCAAAACTTGACACATCTAATAGGACTCAACCTCCAAAATAACTCTCTCACAGGACCTATTCCTGATGTTAACCTTCCTAGCCTTAAGGATTTGGATTTGAGCTTCAACTACTTGAATGGTTCTATTCCTTCAGGTCTCCATAGGTTTCCTGCCTCCTCATTTAGAGGGAATTTGATGTTATGTGGAGCACCTTTGAAACAATGTTCTTCAGTTTCCCCTACTACCACATTGTCTCCACTAACAGTCTCTCAAAGACCAAGTGATCTATCAAACAGGAAAATGAGCAGGGGGGTAAAAGTAGCAATTGCTTTGGGGGCTGTCACATTGCTGTTTCTTCCAGGTCTTATGGTAGTAGTGTTCTGCTGTCTCAAGAAAAAAGTTGGTGAACAAAATGTAGCACCTACAGAGAAAGGTGTGAAGCTTAAGGAGGACTTTGGGAGTGGTGTGCAAGAGCCTGAGAGAAACAAGCTTGTATTCTTTGAAGGTTGTTCTTATAATTTTGATCTGGAGGACTTGTTAAGAGCTTCAGCTGAAGTGCTTGGGAAGGGAAGTTGTGGAACGACATATAAAGCCATCTTGGAGGATGGAACAACAGTGGTTGTGAAGAGGTTAAAAGAAGTGGCGATGGGGAAAAAGGAATTTGAACAGCAAATGGAGATTGTCCAAAGACTTGATCATCATCCAAATGTGATTCCCCTTCGTGCTTACTACTATTCCAAAGATGAAAAACTAATGGTTTATGACTACTCAACAGTCGGCAGTTTTTCCAAGTTATTGCATGGAACAAGGGAAACTGGACGAGCTCCACTAGATTGGGATACAAGATTGAAGATCATGGTTGGAGCTGCTAGGGGCATTGCTCATATCCACTCAGCCAATGGAAGGAAACTTGTGCATGGCAATATAAAATCATCTAATGTGATTCTCTCAATAGATCTTCAGGGCTGCATATCAGATTTTGGCCTAACTCCCCTAACAAATTTCAGTGCCTCCTCCAGAAGTCCAGGCTATGGGGCACCTGAAGTTATCGAATCACGAAAATCCACTCAAAAATCTGATGTGTACAGCTTTGGTGTTCTCCTTCTTGAGATGCTGACTGGCAAAACACCAGTTCAGTATTCAGGGCATGATGAAGTGGTTGATCTTCCAAAGTGGGTCCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGCTAATGAGGTATCCAAACATTGAAGATGAACTTGTGCAGATGCTGCAACTGGCAATGGCATGCGTGGCAGTGATGCCAGACACAAGACCTTCAATGGAGGAAGTTGTTAGGACAATTGAAGAAATGAGAGCATCCATTTATTAA 1827 0.4302 MMLQSYFTTLPIFLLLLVFPQTKADLHSEKQALLDFAAALHHGPKVNWNSSTSICTSWVGVTCNHDGSHVLSVRLPGVGLRGSLPPNTLGKLNGLISLSLRSNSLRGNLPTDLLSLPSLRFIYLQHNNFSGEIPDSLPPQLIFLDLSHNSFTGKIPASIQNLTHLIGLNLQNNSLTGPIPDVNLPSLKDLDLSFNYLNGSIPSGLHRFPASSFRGNLMLCGAPLKQCSSVSPTTTLSPLTVSQRPSDLSNRKMSRGVKVAIALGAVTLLFLPGLMVVVFCCLKKKVGEQNVAPTEKGVKLKEDFGSGVQEPERNKLVFFEGCSYNFDLEDLLRASAEVLGKGSCGTTYKAILEDGTTVVVKRLKEVAMGKKEFEQQMEIVQRLDHHPNVIPLRAYYYSKDEKLMVYDYSTVGSFSKLLHGTRETGRAPLDWDTRLKIMVGAARGIAHIHSANGRKLVHGNIKSSNVILSIDLQGCISDFGLTPLTNFSASSRSPGYGAPEVIESRKSTQKSDVYSFGVLLLEMLTGKTPVQYSGHDEVVDLPKWVQSVVREEWTAEVFDLELMRYPNIEDELVQMLQLAMACVAVMPDTRPSMEEVVRTIEEMRASIY 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01101 608 Gene3D Ribonuclease Inhibitor 27 138 IPR032675 -
Pumo5g01101 608 ProSiteProfiles Protein kinase domain profile. 333 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01101 608 PANTHER OS05G0588300 PROTEIN 10 604 - -
Pumo5g01101 608 Gene3D Ribonuclease Inhibitor 139 229 IPR032675 -
Pumo5g01101 608 MobiDBLite consensus disorder prediction 230 249 - -
Pumo5g01101 608 FunFam Leucine-rich repeat receptor-like protein kinase 139 227 - -
Pumo5g01101 608 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 409 607 - -
Pumo5g01101 608 Gene3D Transferase(Phosphotransferase) domain 1 410 607 - -
Pumo5g01101 608 SUPERFAMILY L domain-like 44 224 - -
Pumo5g01101 608 CDD STKc_IRAK 339 603 - -
Pumo5g01101 608 Gene3D Phosphorylase Kinase; domain 1 300 408 - -
Pumo5g01101 608 FunFam Leucine-rich repeat receptor-like protein kinase 28 138 - -
Pumo5g01101 608 Pfam Leucine Rich Repeat 141 162 IPR001611 GO:0005515
Pumo5g01101 608 FunFam pollen receptor-like kinase 1 301 408 - -
Pumo5g01101 608 Pfam Leucine rich repeat N-terminal domain 28 64 IPR013210 -
Pumo5g01101 608 Pfam Protein kinase domain 336 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01101 608 SUPERFAMILY Protein kinase-like (PK-like) 337 600 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01101 Pumo-Chr5 23924194 23927596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01101 24 606 Receptor kinase-like Gene Family AT5G58300 62.162 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo5g01101 Pkinase 3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01101 - - gmx:100810832 1127.46