Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01092 ATGTATTATGATGCAATCTTGAATGGAGTGGAGATATTCAAAATTAATGATACTACAGGTAATCTGGCAGGGACAAATCCTATTCCTCCTCCTGTGCAAGACATAATTGACCCTTCAACGGCTAGGGGATCTCATCATGGTAAATCAAAGAATCATACAGGCATAATTGCAGGAGGTGTTGCTGGAGGAGTTGTTTTAGTACTTGTGATTGGGCTATTTGCTTTTGCTGCATCCCGTCGTCGTAGGCAAGGAAAGGATTCTGGTACAAGTGAAGGGCCATCTGGTTGGCTTCCACTTTCTCTTTATGGTAATTCACACTCTGCAGCTTCTGCCAAGACCAACACAACAGGAAGCTATGCATCCTCTCTCCCATCAAACCTTTGTCGTCATTTCTCATTTGCTGAAATCAAGGCTGCCACAAACAACTTTGATGAGGCTTTGCTTCTTGGTGTGGGAGGATTTGGTAAGGTTTACAAAGGAGAAATTGATGGCGCAACAACCAAAGTAGCAATTAAACGTGGGAATCCACTATCTGAGCAGGGGGTGCATGAGTTCCAAACTGAGATTGAAATGCTCTCAAAACTTCGTCACCGCCACCTTGTTTCACTGATTGGCTACTGTGAAGAAAACACTGAAATGATCCTTGTCTATGACTATATGGCCTATGGAACACTCAGGGAGCATCTGTACAAGACCCAGAAACCTCCACTTCCATGGAAGCAAAGGCTTGAGATATGCATTGGAGCTGCTCGTGGTTTACACTATCTGCACACCGGTGCTAAACACACTATCATCCACCGTGACGTGAAGACAACAAACATTTTACTGGACGAGAAGTGGGTGGCTAAGGTTTCTGATTTTGGACTGTCAAAAACAGGTCCAACATTGGATAATACCCATGTCAGTACTGTGGTAAAGGGTAGTTTTGGGTACTTGGATCCAGAATACTTCAGGAGGCAGCAACTGACTGACAAATCTGATGTGTACTCATTTGGTGTGGTTCTCTTTGAGATATTGTGCGCTCGCCCTGCTTTGAACCCCACCCTTGCTAAGGAGCAAGTGAGTCTGGCTGAGTGGGCAGCTCATTGCTACAAGAAAGGCATTCTTGACTCAATCATTGATCCTTATCTAAAGGGCAAGATAGCTCCAGAATGCTTCAGGAAGTTCGCCGAGACTGCAATGAAGTGCGTGGCTGACCAGGGCATCGAAAGGCCATCCATGGGTGATGTCTTGTGGAACCTTGAATTTGCTTTGCAGCTGCAAGAAAGTGCAGAGGAGAGTGGAAACGGCTTTGGTGACATTCACGGTGAAGAGGAGCCGTTGTATACAGATTCTAAAGGAAAGAAGGACTCTGATCCAGGTTATGATGGTAATGTGACTGACTCTAGAAGCAGTGGCATTTCAATGAGCATTGGAGGTAGAAGCTTGGCCAGTGAAGACTCTGATGGGCTAACCCCTAGTGCTGTGTTCTCCCAGATCATGAATCCAAAAGGTCGTTAA 1500 0.454 MYYDAILNGVEIFKINDTTGNLAGTNPIPPPVQDIIDPSTARGSHHGKSKNHTGIIAGGVAGGVVLVLVIGLFAFAASRRRRQGKDSGTSEGPSGWLPLSLYGNSHSAASAKTNTTGSYASSLPSNLCRHFSFAEIKAATNNFDEALLLGVGGFGKVYKGEIDGATTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAYGTLREHLYKTQKPPLPWKQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLAKEQVSLAEWAAHCYKKGILDSIIDPYLKGKIAPECFRKFAETAMKCVADQGIERPSMGDVLWNLEFALQLQESAEESGNGFGDIHGEEEPLYTDSKGKKDSDPGYDGNVTDSRSSGISMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01092 499 CDD STKc_IRAK 149 415 - -
Pumo5g01092 499 FunFam Receptor-like protein kinase FERONIA 220 430 - -
Pumo5g01092 499 MobiDBLite consensus disorder prediction 427 499 - -
Pumo5g01092 499 FunFam Receptor-like protein kinase FERONIA 115 219 - -
Pumo5g01092 499 ProSitePatterns Protein kinases ATP-binding region signature. 149 172 IPR017441 GO:0005524
Pumo5g01092 499 SUPERFAMILY Protein kinase-like (PK-like) 117 416 IPR011009 -
Pumo5g01092 499 PANTHER OS07G0166700 PROTEIN 127 421 IPR045272 GO:0004714|GO:0006468
Pumo5g01092 499 SMART serkin_6 143 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01092 499 ProSiteProfiles Protein kinase domain profile. 143 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01092 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Pumo5g01092 499 MobiDBLite consensus disorder prediction 457 492 - -
Pumo5g01092 499 Gene3D Phosphorylase Kinase; domain 1 128 219 - -
Pumo5g01092 499 Gene3D Transferase(Phosphotransferase) domain 1 220 432 - -
Pumo5g01092 499 Pfam Protein tyrosine and serine/threonine kinase 149 411 IPR001245 GO:0004672|GO:0006468
Pumo5g01092 499 MobiDBLite consensus disorder prediction 431 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01092 Pumo-Chr5 23683051 23684550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01092 2 499 Receptor kinase-like Gene Family AT3G51550 82.036 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo5g01092 PK_Tyr_Ser-Thr 9.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01092 - - gmx:100499644 944.11