Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo5g01087 | ATGGCTTCCCTTCTCTCTACAACTGCAACCACACTTCAACACAATCACACAATCTGCTTCTCTCCTCTGAAACCCACCACCCCAAATAACATTTCCTTATCAACAAACCGTTTCAAGAGTAACTCTGGAAAGTGCGATGCATTTTTTGGTAACATCCCCAAAGACTTGTTGGAGACCACTTTTCATGTAGACCAGTTTCCCATCTTCCAATCAGTGTTAGTGAAGTTTCAGAATGTAACTGAAGACTTATCAGAGGTGCAGAGGTGGGGGTTTGTGATACTTGCAGGGCTGACATGGGCTTATTTAACTGCTAGGCCGGGTGTTCTCGTTGGCGCCATCGATGCATTCCTTTTGGCTCCTATCCAACTGGTTTTGGACAGTTTATCTGGAAGGAGAAATCTGAAGAGGACTGATTTTCTTGTTGGAGATAAGCTAGGAGAAGGGTCATTTGGTGTTGTTTATTCAGGTGTTTTGGTTCCAAGGAATGTAGATGTGCAAGAGTGGATGCAGAAAGGTGGAAGAGGCAAGGTGACAAAGTTGGATGCCAAATCTAAGGATAAAGTCATTCTTAAAAAGGTAAAGGTTGGAATTGAAGGAGCAGAGGAATTTGGTGAATTTGAGGAGTGGTTCAATTATAGACTCTCTAGAGCAGCTCCTGAAACATGTGCTAAGTTTCTTGGAAGTTTTGTAGCTGACAAAACCAATTCACAGTTCACAAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGGCCGCTCTCTTGCTGATTACATGGTAGATCAAAGATTCCCTTCAAACTTAGAGTCTATCATGTTTGGACGTGTCTTGCAAGGTGTAGACTCTTCTAAACGGAATGCATTGATCATCAAGCAAATAATGCGCAAGATCATTACATCTCTTAAGAAAATTCATGACACAGGCATAGTTCACAGGGATGTTAAGCCTGCCAACTTGGTGGTTACCAAACGGGGGCAGATTAAACTCATTGATTTCGGTGCAGCAACAGACCTTAGAATTGGAAAGAATTATGTTCCCGATTATACCCCTTTGGATCGTGACTACTGTCCCCCTGAACTATATGTGCTACCTGAAGAAACACTAAGTCTTCCACCAGAGCCTATTGCAGCTTTCCTTTCACCAATCTTGTGGCAGTTAAACAGTCCTGATCTGTTTGATATGTATTCTGCTGGGATTGTACTCCTGCAAATGGCAATACCAACCTTAAGGTCTCCAGCTGCTTTGAAGAATTTCAATTTGGAGATAAGAACATATGGATATGATTTGAAGAAATGGAGGGCATCTACTCGCATGAGGTCTGACTTCCAAATTCTCGATAGTGACTCTAGTAGAGGGTGGGACTTAGCAACAAAGCTTATCTCCAAGAGAGGTTCCCAAAGAAGAGGACGTTTATCTGCCGCTGCTGCTTTGAGGCATCCTTATTTCCTTCTGGGTGGGGATCAGGCAGCCGCAGTCCTTTCAAAATTAAGCTTAAGCACAAAGGGGAGCTCGTATGATATGGATATAATGGCATCCCATCTAAAGGCCAACTAA | 1554 | 0.4292 | MASLLSTTATTLQHNHTICFSPLKPTTPNNISLSTNRFKSNSGKCDAFFGNIPKDLLETTFHVDQFPIFQSVLVKFQNVTEDLSEVQRWGFVILAGLTWAYLTARPGVLVGAIDAFLLAPIQLVLDSLSGRRNLKRTDFLVGDKLGEGSFGVVYSGVLVPRNVDVQEWMQKGGRGKVTKLDAKSKDKVILKKVKVGIEGAEEFGEFEEWFNYRLSRAAPETCAKFLGSFVADKTNSQFTKGGKWLVWKFEGGRSLADYMVDQRFPSNLESIMFGRVLQGVDSSKRNALIIKQIMRKIITSLKKIHDTGIVHRDVKPANLVVTKRGQIKLIDFGAATDLRIGKNYVPDYTPLDRDYCPPELYVLPEETLSLPPEPIAAFLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSPAALKNFNLEIRTYGYDLKKWRASTRMRSDFQILDSDSSRGWDLATKLISKRGSQRRGRLSAAAALRHPYFLLGGDQAAAVLSKLSLSTKGSSYDMDIMASHLKAN | 517 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo5g01087 | 517 | ProSiteProfiles | Protein kinase domain profile. | 139 | 482 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g01087 | 517 | SMART | serkin_6 | 139 | 482 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g01087 | 517 | Gene3D | Phosphorylase Kinase; domain 1 | 126 | 249 | - | - | |
Pumo5g01087 | 517 | Pfam | Protein kinase domain | 289 | 482 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pumo5g01087 | 517 | Gene3D | Transferase(Phosphotransferase) domain 1 | 280 | 484 | - | - | |
Pumo5g01087 | 517 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 309 | 321 | IPR008271 | GO:0004672|GO:0006468 | |
Pumo5g01087 | 517 | SUPERFAMILY | Protein kinase-like (PK-like) | 136 | 483 | IPR011009 | - | |
Pumo5g01087 | 517 | PANTHER | SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED | 37 | 501 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo5g01087 | Pumo-Chr5 | 23656844 | 23660626 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo5g01087 | 139 | 338 | MAP Kinase Kinase Kinase | AT3G13530 | 25.123 | 5.71e-11 | 63.5 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | Group-Pl-4 | Pumo5g01087 | Pkinase | 5.1e-21 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo5g01087 | - | - | gmx:100795624 | 878.626 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pumo5g01087 | 5 | 23656844 | 23660626 | Pumo5g01087 | 5 | 23656844 | 23660626 | ECH |