Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01083 ATGAGTTCCGATGAGTCCTTGCTTTTGGAATCGTCGGATTCTCGTCCAGTGATTCATCACCGCCGTGGGAAATCGGGTTCCCGGAGCTACCTCTCCGGCAATGGTACCTTCACCTCGTCCGCGTTTGACGATGCTTTCGCCGAGAGCATCGATTTGGATGTTGTGAAGGAGCGAGACGGTGGGGACGTTGTGTTGTCTAGGGATTGTAGTTTCCACACTGCATCGTTTGGGAATAACAACAGTGGTTCTGAGAGGCGTGTTGAGGTCCAGTTCCCGTGGCAGCTTCCCTTGGAATGCCCCCCGCGCGAGAGGAGGCGCTCGGCATCGTGGGGTGCAATGGAACTGCGTGATGACGATAGCCGGAGCGTGCCGTTTGAGATATCCGGAGCTTCATCTCAGGTGCAGGACAGGTTGAATAGTAAATCACAGAGAATTCGGCACAAGAGTGTGCAATTTGATGATGCTGCCTTACACGAGGACAGTGCAAGGCTGATCTATATCAATGATCCGAGGAGGACCAATGATAAGTATGAGTTCACCGGGAATGAGATCCGGACTAGTAGATACACCTTTGTTACCTTTTTGCCCAAGAATCTGTTCATTCAGTTTCATCGGGTTGCCTATCTGTATTTCCTTGCTATTGCAGCTCTCAATCAGCTTCCGCCACTGGCTGTGTTTGGGAGGACGGTGTCGCTTTTTCCCCTATTGTTTGTGCTTTGTGTCACGGCTATTAAGGATGGCTATGAGGATTGGCGGAGGCACAGGTCAGATCGCAATGAGAACAACCGGGAGTCTCTGGTGCTTCAGTCCGGTGATTTCCGATCGAAGAAATGGAAAAAGATACAAGCTGGTGAGGTTGTTAAGATCTTTGCTGATGAGACAATTCCGGCTGACATGGTCTTGTTGGGGACGAGTGATCAAAGTGGGCTTGCCTATATTCAGACAATGAATTTGGATGGAGAATCAAATTTGAAGACAAGGTATGCTAGGCAGGAAACAGCTTCGGCAGTTGCTTCAGAAGCTTGTGATGTTCTTGGGGTAATTAGATGCGAGCAACCAAACCGGAATATTTATGAGTTCACGGCCAACATGGAGTTCAATGGGCTTAAGTTTTCCCTTAGCCAGTCAAACATTGTTCTGCGTGGCTGCCAACTGAAGAACACAGATTGGATAATTGGTGTTGTAGTTTATGCAGGACAGGAAACAAAAGCAATGTTGAACAGTGCAGCTTCTCCTTCCAAGAGAAGCAGACTGGAAACTTACATGAACAGAGAAACCCTTTGGTTGTCAATTTTTCTTTTTATCATGTGTTTGGTTGTGGCCATTGGGATGGGTCTTTGGCTGGTACGCCACAAGAACCAGCTGGATACCTTGCCTTACTACAGAAAAAGATACTTCGCCAATGGACCAGATAATGGAAAGAAATATAAGTATTATGGAATACCAATGGAAGCATTTTTCTCCTTTTTGAGTTCTGTTATTGTGTTTCAGATAATGATACCAATATCTCTTTACATCACAATGGAGTTGGTTCGATTGGGTCAGTCATACTTCATGATTGAAGACAGGGATATGTATGATGTCAGCTCTGGGTCAAGGTTTCAGTGTAGATCATTAAATATAAATGAAGATTTGGGTCAAATACGCTATGTATTTTCAGACAAGACAGGAACACTAACAGAAAACAAAATGGAATTCCAGAGGGCTAGTGTACATGGGAAGAATTACGGGAGCTCCTTGCCTATGGTTGATAATACAGCCACGGCAGATGTTATTCCTAAACGGAGATGGAAGCTCAAATCTGAAATTGCAGTTGATTCTGAACTGATGACAATGTTGCGGAAAGACTCAAATAGAGAAGAAAAAATTGCTGCTCATGAGTTTTTTCTTACATTGGCTGCTTGTAACACTGTAATCCCTATACCTGGTGATGATGGATTTTCCAGTCTTGGAACTAGTGAATTAAATGAAGATATTAGACACATTAATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCAGCCTCTGCTTATGGATATACTCTTTTTGAACGTACATCTGGGCATATTGTTATTGACGTCAACGGTGAGAAACTCAGATTGGACGTATTGGGTCTGCATGAGTTTGATAGTGTGCGAAAGAGAATGTCTGTTGTTATTCGGTTTCCTGACAACGCGGTAAAGGTGTTAGTCAAAGGTGCTGATACTTCAATGTTTAGCATTTTGGAAAATGGCAGTGAGAGTAACAATAACATATGGCATGCAACTCAGAGCCATTTGAATGAATATTCTTCACAAGGTTTGCGCACTCTTGTAGTTGCCTCCAGGGATCTTTCTGATGCTGAACTTGAGGAGTGGCAAAGCAGGTATGAAGAGGCAAGCACTTCGTTGACTGACAGAGCTACTAAACTACGGCAAACAGCAGCTCTTATAGAAAGCAATTTAAAGTTACTTGGAGCAACTGGAATTGAGGACAAGCTACAAGAGGGTGTACCAGAAGCAATTGAGGCTCTACGGCAAGCTGGAATCAAGGTGTGGGTTCTTACTGGTGATAAGCAAGAGACGGCAATTTCAATTGGTCTTTCCTGCAAACTTCTTAGTGGAGATATGCAGCAGATTATTATAAATGGCACTTCAGAGATCGAATGTAGAAATCTTTTGGCTGATGCTAAAGCCAAATATGGTGTGAAATCTTCAAGTGGAGGGCGTCGGAATCTGAATGGACATGGTGATCTTGATATTCCCAATGGTGCAAAGTCTTTGAGCTTTCCCAAATGGAATCCTGGAAACGAAGAAGGAACTAATGCTCCATTGGCACTCATAATTGATGGAAACAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCCTGTAGGGTTGTGCTGTGTTGTCGAGTTGCACCCTTGCAAAAGGCAGGAATTGTTGATTTGATAAAGAGCCGCACAGATGATATGACACTGGCCATAGGTGATGGGGCCAATGACGTGTCAATGATCCAAATGGCAGATGTTGGTGTAGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCTATGGGACAGTTTCAGTTCTTGAAAAAATTACTTCTGGTTCATGGGCACTGGAATTATCAGCGTGTCGGTTATTTAGTTTTGTACAACTTCTACCGCAATGCTGTCTTTGTAATGATGTTATTTTGGTATATATTATGCACGGCTTTTTCTACAACTTCTGCGTTGACAGATTGGAGTAGTGTCTTCTATTCTGTGATATACACATCTATACCTACTATTATTGTTGGTATTCAGGACAAGGACTTGAGTCATAGGACACTCTTGCAGTATCCAAAACTGTATGGTGCAGGTCACAGGCAAGAAGCTTACAATATGCAATTATTTTGGATCACAATGATGGACACAGTATGGCAGAGCCTTGTTCTTTTCTACATCCCATTGTTCACCTATAAGGACAGTTCAATTGATATATGGAGCATGGGCAGTTTGTGGACGATTGCAGTTGTTATCCTTGTAAATGTACACCTTGCTATGGACATCAACCGTTGGGTATTAATTACTCATTTTGCTATCTGGGGATCGATAATCATTACATATGGTTGCATGGTGGTATTGGATTCTATACCTGTCTTTCCCAATTACTGGACTATTTATCATCTGGCAAGGTCCCCAACATATTGGATAACAATTTTGCTTATAATTATTGTGGCATTGCTCCCTCGCTTTACTTGCAAAGTTGTTTATCAAATCTTTTGGCCTTCGGATATCCAGATAGCTAGAGAAGCTGAGTTAATGAGAAAACGACATGATAATTTGCAGCCTAGGCAACAAGTTTCCAGTTAA 3885 0.4309 MSSDESLLLESSDSRPVIHHRRGKSGSRSYLSGNGTFTSSAFDDAFAESIDLDVVKERDGGDVVLSRDCSFHTASFGNNNSGSERRVEVQFPWQLPLECPPRERRRSASWGAMELRDDDSRSVPFEISGASSQVQDRLNSKSQRIRHKSVQFDDAALHEDSARLIYINDPRRTNDKYEFTGNEIRTSRYTFVTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRSKKWKKIQAGEVVKIFADETIPADMVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQETASAVASEACDVLGVIRCEQPNRNIYEFTANMEFNGLKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMLNSAASPSKRSRLETYMNRETLWLSIFLFIMCLVVAIGMGLWLVRHKNQLDTLPYYRKRYFANGPDNGKKYKYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDVSSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFQRASVHGKNYGSSLPMVDNTATADVIPKRRWKLKSEIAVDSELMTMLRKDSNREEKIAAHEFFLTLAACNTVIPIPGDDGFSSLGTSELNEDIRHINYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNAVKVLVKGADTSMFSILENGSESNNNIWHATQSHLNEYSSQGLRTLVVASRDLSDAELEEWQSRYEEASTSLTDRATKLRQTAALIESNLKLLGATGIEDKLQEGVPEAIEALRQAGIKVWVLTGDKQETAISIGLSCKLLSGDMQQIIINGTSEIECRNLLADAKAKYGVKSSSGGRRNLNGHGDLDIPNGAKSLSFPKWNPGNEEGTNAPLALIIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVMMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIIVGIQDKDLSHRTLLQYPKLYGAGHRQEAYNMQLFWITMMDTVWQSLVLFYIPLFTYKDSSIDIWSMGSLWTIAVVILVNVHLAMDINRWVLITHFAIWGSIIITYGCMVVLDSIPVFPNYWTIYHLARSPTYWITILLIIIVALLPRFTCKVVYQIFWPSDIQIAREAELMRKRHDNLQPRQQVSS 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01083 1294 Pfam Phospholipid-translocating P-type ATPase C-terminal 1028 1268 IPR032630 -
Pumo5g01083 1294 Pfam E1-E2 ATPase 263 510 - -
Pumo5g01083 1294 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 558 834 IPR023299 GO:0000166
Pumo5g01083 1294 SUPERFAMILY Calcium ATPase, transduction domain A 262 404 IPR008250 -
Pumo5g01083 1294 PRINTS P-type cation-transporting ATPase superfamily signature 1000 1019 - -
Pumo5g01083 1294 PRINTS P-type cation-transporting ATPase superfamily signature 552 566 - -
Pumo5g01083 1294 Pfam Phospholipid-translocating ATPase N-terminal 165 230 IPR032631 -
Pumo5g01083 1294 NCBIfam HAD-IC family P-type ATPase 485 575 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo5g01083 1294 NCBIfam HAD-IC family P-type ATPase 970 1086 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo5g01083 1294 NCBIfam HAD-IC family P-type ATPase 811 869 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pumo5g01083 1294 FunFam Phospholipid-transporting ATPase 663 798 - -
Pumo5g01083 1294 SFLD p-type atpase 536 1051 IPR044492 -
Pumo5g01083 1294 NCBIfam phospholipid-translocating P-type ATPase 179 1275 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pumo5g01083 1294 Gene3D - 661 800 IPR023299 GO:0000166
Pumo5g01083 1294 Gene3D - 238 408 - -
Pumo5g01083 1294 CDD P-type_ATPase_APLT_Dnf-like 181 1160 - -
Pumo5g01083 1294 Pfam Cation transport ATPase (P-type) 656 742 - -
Pumo5g01083 1294 SUPERFAMILY Calcium ATPase, transmembrane domain M 179 1267 IPR023298 -
Pumo5g01083 1294 FunFam Phospholipid-transporting ATPase 817 1040 - -
Pumo5g01083 1294 SUPERFAMILY HAD-like 539 1044 IPR036412 -
Pumo5g01083 1294 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 151 1278 - -
Pumo5g01083 1294 Gene3D - 817 1040 IPR023214 -
Pumo5g01083 1294 ProSitePatterns E1-E2 ATPases phosphorylation site. 554 560 IPR018303 -
Pumo5g01083 1294 SFLD C1.7: P-type atpase like 536 1051 - -
Pumo5g01083 1294 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01083 Pumo-Chr5 23610147 23617932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01083 142 1277 Primary Pumps ATPases AT5G04930 57.692 0.0 1341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01083 K14802 - gmx:100789830 2424.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01083 5 23610147 23617932 Pumo5g01083 5 23610147 23617932 ECH
Pumo5g01083 5 23610147 23617932 Pumo7g01840 7 49082493 49087699 PCT