Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01069 ATGGGGTGCTTCACTGTATTGAAGAGCAAGAAGAAAAAGTCTGATCCAATTACATATGTAAAACGTGTAAGCCATAATGAGAACATACCTACTGTACTGCCAGAACCTCAAACTCGTACTCGCTCACTCCAGTCTGCTCCTCCTAGTTTTAGGACCAGAGTGAAACCCATTCAACCCATTAATAAAGTCAGTAATAATAGAACACGGACGTTATCTGCTCCATCAACTCTTGATGCAGCAGAACAAGATGCTTTGGCTTCAATTGAGTATGAGGAACAAGAAGAGTCAAGACACCGAGCTGGATCAATGAAGGAGCAGCGTTCATCTAGTCCACAACCTTTACCACTTCCATCCCCTCAGGGAGGTGGTGCATTGAAGGCTATTGGCAGCTTTAAGTCAGTGACATCTAGTGGTCCTCTCCATGCTTCTGGACCTTTGCCGCTCCCACCTACTGGGTCACTTCGGAATTTTCTGTATGACGAAATTGCTGCTGCTTGCCATTATTTCTCTTCTGATAGATGCATGTCAGAATGTCTTTCGTCCACCATATATAAGGCTTCCTTTGGTGATGATGTTTCAAGTTCGAAGAAGTTTGAAGCCACTGTCACACGGCTTCACCCATCATCTCAGGGCTTGAAGGAATTCATAAATGAAGTTAATACTCTTGCATCTTTGCAACATCCAAATCTCTGTAAATTGCTAGGATTTCATGCACGAGAGGGTTCAGAACATAGAATGTTGGTTTATGAGAGGCTATACCATGGAAGCTTGGATCGCTTATTGTATGGGAGATCTGATGGGCCATCAATTGATTGGAATACAAGAATGAAAATTGCTATATGTGCTGCACAAGGTCTAACTTTCTTGCACGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTCTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATGTTCCCGAGGAAGAGATTTCAAGCAGTTCGTCTGCTGTTGGAAACCTATCAATGGAAACACTGGAGAAAGGAATGCTCACTCCAAAGAGCAATGTATGGAGTTTTGGCATTTTCCTTCTGGAGCTACTTACAGGAAGAAAGAATCTTGATAGCCGTCACCCCAAGGAAGAGAGGAATTTAGTCAAGTGGAGCCGGCCTTTCCTAGCCGACAACTACCGTCTGTCGTTGATCATGGATCCTCAACTCAAGGGTCGTTTTCCTTCTAAAGCAGCAAGAACAATAGCTGACATAGCACAAAGATGCCTTCAAAAGGAGCCATCAGACAGACCTACCATGAGAACTGTTGTTGAGCATCTCAAGATGATACAGGATTTGAAATACTCGTGCCGGTTCCCGCTGCAAGAGCCAGCATCAAACGCTGGAAAACATATGTCAAGATCACCAAGTCTCAATGGCATCATATGCCCAGCACCAAGGTTGAGTTTCTCACCATCACCACCATCAGGAGTCCCAGTATCTGTTTCACCTCCAAGATGGTCTAATGTAGTAGTGCCCATTCTCCCTCCGCCGCGTGCTTGTTCTTCCAGTCTCTCTTTGGAGGAGCTTGATAGGCAGGAAAGCCGCAAGTCATCATCCTCAGCCTCTAGAAGGGCTAGTGTTGAAGGATTTTGA 1647 0.4451 MGCFTVLKSKKKKSDPITYVKRVSHNENIPTVLPEPQTRTRSLQSAPPSFRTRVKPIQPINKVSNNRTRTLSAPSTLDAAEQDALASIEYEEQEESRHRAGSMKEQRSSSPQPLPLPSPQGGGALKAIGSFKSVTSSGPLHASGPLPLPPTGSLRNFLYDEIAAACHYFSSDRCMSECLSSTIYKASFGDDVSSSKKFEATVTRLHPSSQGLKEFINEVNTLASLQHPNLCKLLGFHAREGSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHVPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADNYRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSDRPTMRTVVEHLKMIQDLKYSCRFPLQEPASNAGKHMSRSPSLNGIICPAPRLSFSPSPPSGVPVSVSPPRWSNVVVPILPPPRACSSSLSLEELDRQESRKSSSSASRRASVEGF 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01069 548 Gene3D Transferase(Phosphotransferase) domain 1 252 456 - -
Pumo5g01069 548 MobiDBLite consensus disorder prediction 521 548 - -
Pumo5g01069 548 PANTHER OS01G0588500 PROTEIN-RELATED 99 448 - -
Pumo5g01069 548 MobiDBLite consensus disorder prediction 30 51 - -
Pumo5g01069 548 ProSiteProfiles Protein kinase domain profile. 169 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01069 548 SUPERFAMILY Protein kinase-like (PK-like) 148 454 IPR011009 -
Pumo5g01069 548 MobiDBLite consensus disorder prediction 90 126 - -
Pumo5g01069 548 MobiDBLite consensus disorder prediction 58 77 - -
Pumo5g01069 548 MobiDBLite consensus disorder prediction 90 104 - -
Pumo5g01069 548 Pfam Protein tyrosine and serine/threonine kinase 183 444 IPR001245 GO:0004672|GO:0006468
Pumo5g01069 548 MobiDBLite consensus disorder prediction 27 78 - -
Pumo5g01069 548 Gene3D Phosphorylase Kinase; domain 1 150 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01069 Pumo-Chr5 23485151 23490444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01069 148 448 Receptor kinase-like Gene Family AT4G02010 36.928 2.73e-55 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Pumo5g01069 PK_Tyr_Ser-Thr 5.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01069 - - gmx:100809117 1008.82