Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01057 ATGGAATTGCCTGATACAATCAATACAGCCATGCCCATGTACAAGGGGAGATTCTGCACGAGTGGTGGAGTTAAGGCTCAGCTTGGTTATGTTGAAACTGATCCATCTGGTAGATATGGTCGTTTCAGGGATGTTCTGGGCAAAGGAGCAATGAAGACCGTGTATAGGGCATTTGATGAGTTACTAGGGATTGAAGTGGCTTGGAACCAAGTCAAGCTTGGTGATGTCTTTCACTCACCAGAGCAACTTCAGCGCCTTTATTCAGAGGTTCATCTCCTAAAACACCTTGACCATGACTCTATGATGATCTTCTATGGTTCTTGGATCGATGTCAACAACAGAACCTTCAACTTCATTACTGAATTGTTCACCTCCGGCACACTTAGAGAGTACAGGCAGAAGTATAGGAGAGTAGATATCAGAGCATTTAAGAATTGGGCTCGCCAGATTCTAAGTGGTTTGGAGTATTTACACAGCCATAATCCTCCTGTGATACATAGAGATCTCAAGTGTGACAACATCTTTGTCAATGGCCATCAGGGGCGGGTCAAGATTGGTGATTTAGGCCTGGCAGCTATACTTAAAAGCTCCCAACATGCACACAGTGTCATAGGTACACCAGAATTCATGGCACCAGAACTGTATGAAGAGAAATACAACGAGCTGATAGATATATACTCCTTCGGTATGTGCATGATAGAGCTGCTTACTTTTGAGTTCCCATACAGTGAGTGCGCCAACCCAGCTCAAATATACAAGAAAGTTACTTCGGGGAAGCTACCTGAAGCGTTTTACAGAATCCAAGATTTGGAAGCCCAGAAGTTTGTGGGAAAATGTTTGGCAAATGTGTCAGAGAGACCATCAGCGAAGGAGCTCTTGTTGGACCCTTTTTTAGCCATGGACCAACTTGAAATACCATTGCCACCAAGCATACCATCATTATGTACAAATAAATCTTTCAAGCTTAATTGCCCTGCACCAGTTCCCAGTGAGCATCATCGTGATCAAACAAAGAGCGCGGATATGACAATCACTGGATCAATAAACGAAGAGGACAACACTGTTTTCCTTAAAGTGCGGATGTCTGACATAACGGGGCACACAAGACATGTGTTCTTCCCATTTGACACATTAAAGGACACGGCTATTCAGGTGGCGATGGAGATGGTGCAAGAACTTGAGATTAGCCACTTGGAACCATTGGAGATTGCTGCAATGATAGATAATGAGGTATCAGCTCTAGTTCCAACTTGGAGGGACAGGGTTAAGTGTCACCACCAACGACAGTACAGCTTTAACTACGAAGAAGATGAAGATGTCAATAACCATCACCCTTTCTTCTTATCATCTTCTCCATCATCCCCTCGCGGTTCTGGCCACATGTCTGCTTCCAACTCCTTCAAGACCCACGTTCGTGGGAACCATTACCCGTTTACTCAAGAGTGGCCTCAAGATGATCCATTTTTGAACGACGACGCAAGCTCTCAAGCCTCAGTGAACTCCTTCAAGTGTTCGAGTTTCCAGTTCTGCGAGCCGGGCCGCGAAGACGTCGAGCACGCCCCAACAGATGGAGCCGAACGCAACAACAAGTGCACAGCATTACCATACCGTGCCGAAGAAGCAGCAGAAGCCACCTTCGCCAAACCGTTTAATTACTACCCGCCGCGAATGGACTCTTCGTGCGGTTGCAGGTTCGGGTCGACGAGCCACACGTGCCCGAGGCTAACGAGGATCCGGTCGTGCCCGCACGAGCGGAGGAGCCAGCAGCTCCAGCGGTCGATGATGTTGGAGGAGATGTACAAGTACAAGACACGCTTCTTCAACACTGTCGGCGCCGTTGAGAACATCGCGTTTCGGCATCCAGATAGAGGTGGTTGCTTTGCTCGCGTGTAG 1893 0.4733 MELPDTINTAMPMYKGRFCTSGGVKAQLGYVETDPSGRYGRFRDVLGKGAMKTVYRAFDELLGIEVAWNQVKLGDVFHSPEQLQRLYSEVHLLKHLDHDSMMIFYGSWIDVNNRTFNFITELFTSGTLREYRQKYRRVDIRAFKNWARQILSGLEYLHSHNPPVIHRDLKCDNIFVNGHQGRVKIGDLGLAAILKSSQHAHSVIGTPEFMAPELYEEKYNELIDIYSFGMCMIELLTFEFPYSECANPAQIYKKVTSGKLPEAFYRIQDLEAQKFVGKCLANVSERPSAKELLLDPFLAMDQLEIPLPPSIPSLCTNKSFKLNCPAPVPSEHHRDQTKSADMTITGSINEEDNTVFLKVRMSDITGHTRHVFFPFDTLKDTAIQVAMEMVQELEISHLEPLEIAAMIDNEVSALVPTWRDRVKCHHQRQYSFNYEEDEDVNNHHPFFLSSSPSSPRGSGHMSASNSFKTHVRGNHYPFTQEWPQDDPFLNDDASSQASVNSFKCSSFQFCEPGREDVEHAPTDGAERNNKCTALPYRAEEAAEATFAKPFNYYPPRMDSSCGCRFGSTSHTCPRLTRIRSCPHERRSQQLQRSMMLEEMYKYKTRFFNTVGAVENIAFRHPDRGGCFARV 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01057 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Pumo5g01057 630 ProSiteProfiles Protein kinase domain profile. 40 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01057 630 SUPERFAMILY Protein kinase-like (PK-like) 42 299 IPR011009 -
Pumo5g01057 630 Pfam Protein kinase domain 44 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01057 630 Gene3D Transferase(Phosphotransferase) domain 1 123 303 - -
Pumo5g01057 630 SMART serkin_6 40 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01057 630 FunFam probable serine/threonine-protein kinase WNK9 123 303 - -
Pumo5g01057 630 CDD STKc_WNK 38 298 - -
Pumo5g01057 630 FunFam Probable serine/threonine-protein kinase WNK1 25 121 - -
Pumo5g01057 630 Gene3D Phosphorylase Kinase; domain 1 24 121 - -
Pumo5g01057 630 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 28 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01057 Pumo-Chr5 23366604 23371486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01057 21 439 MAP Kinase Kinase Kinase AT3G51630 65.258 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pumo5g01057 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01057 K08867 - gmx:100272206 1138.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01057 5 23366604 23371486 Pumo5g01057 5 23366604 23371486 ECH
Pumo5g01057 5 23366604 23371486 Pumo7g01735 7 45749750 45755421 PCT