Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01051 ATGAGAGAGGCGCAGAACGACACCGTTGCAACAACAAACGACGACGAGGTGCCGTCCGGCGTCGTTTTGTTCGGGAAGTACGAGTTAAAGAGGTTGCTGGGAGTTGGCGCATTCGCGAAGGTGTACCACGCGACGAGCGTGGACACGCGCCAGAGCGTGGCGGTGAAGGCCGTGAGCAAAAACAAGGTCCTCAACGGAGGCTTCGCTGCCAACGTGGAACGCGAGATCTCCATCATGCGCCGCCTCCACCACCCCAACATCATTAACCTCTTCGAAGTACTCGCGACCAAAACAAAAATCTACTTCGTCATGGAGTTCGCCGCCGGCGGGGAGCTCTTCCACGAGGTCGCCGGCAAGGGGCGGCTCGAGGAGGAAACAGCCAGATTTTACTTCCGGCAACTCATCTCCGCCGTGAAGCACTGCCACTCCCGCGGCGTCTTCCACCGCGACCTCAAGCTCGACAACCTCTTACTCGACGAGAACGGGAACCTTATGGTCTCCGATTTCGGGTTGAGTGCGGTTACGGGTCAGATCCGACCCGACGGGCTGTTGCACACGGTTTGTGGGACCCCCACCTACGTGGCACCCGAGATTCTCGCGAAGAGAGGCTACGACGGTGCGAAAGTGGATCTGTGGTCGTGCGGCGTCGTTTTGTTCGCGCTCACTGCAGGGTATTTACCCTTCAATGATTACAATGTTACCGTTTTGTATAGGAAGATTTACCGCGGTCAATTTCGGTTCCCTAGGTGGATGTCGCATGATCTGAGGTTCCTCTTATCACGCCTCTTGGACACGAATCCCGAGACAAGGATCACGGTTGACGAGGTCTTGGAAGACACGTGGTTCAACGTGGGTGATCAGTGCCGGTTCAACCGAGTTTTGGTCAAGGAAAGTGAGTGCGAGAAGCAATTGGGTCGAACCGGGTTCGAGTCATTGAACTGCGTTCGACCTAATTTCTTTTTCAGTCCGGATTGGATATGTCGACTTTGTTTGAGGATTTGA 1002 0.5529 MREAQNDTVATTNDDEVPSGVVLFGKYELKRLLGVGAFAKVYHATSVDTRQSVAVKAVSKNKVLNGGFAANVEREISIMRRLHHPNIINLFEVLATKTKIYFVMEFAAGGELFHEVAGKGRLEEETARFYFRQLISAVKHCHSRGVFHRDLKLDNLLLDENGNLMVSDFGLSAVTGQIRPDGLLHTVCGTPTYVAPEILAKRGYDGAKVDLWSCGVVLFALTAGYLPFNDYNVTVLYRKIYRGQFRFPRWMSHDLRFLLSRLLDTNPETRITVDEVLEDTWFNVGDQCRFNRVLVKESECEKQLGRTGFESLNCVRPNFFFSPDWICRLCLRI 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01051 333 FunFam CAMK family protein kinase 22 315 - -
Pumo5g01051 333 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Pumo5g01051 333 SUPERFAMILY Protein kinase-like (PK-like) 23 287 IPR011009 -
Pumo5g01051 333 ProSiteProfiles Protein kinase domain profile. 27 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01051 333 Gene3D Transferase(Phosphotransferase) domain 1 21 313 - -
Pumo5g01051 333 SMART serkin_6 27 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01051 333 Pfam Protein kinase domain 27 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g01051 333 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Pumo5g01051 333 FunFam Aurora kinase A 21 110 - -
Pumo5g01051 333 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 22 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01051 Pumo-Chr5 23293943 23294944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01051 22 315 CBL-interacting serine-threonine protein kinases AT2G30360 63.390 3.37e-137 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pumo5g01051 Pkinase 1.1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01051 - K12761 gmx:100788245 561.607