Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01042 ATGTCAAAGAAGCCTGCCTCAATTATAATCTCGAAGTTGGAAGAAATTTGTAAGAGGCTTCACTTGAAAGTAAGGAAGAAAGATGGAGGCTTGCTCAAGTTGGAAGGTTCCAAGGAAGGCAGGAAAGGGACTTTGGGTGTTGATGCTGAGATTTTTGAGATTACCCCACACTTCCATATGGTGGAACTTAGAAAGTCCAATGGGGATACCATGGAGTTCCAGAAGCTTTTTAAACAGGATATAAGACCAGCACTTAAGGACATTGTTTGGACCTGGCAAGGAGAACAACCACAGCAAGAACAAGAGCAAGAGCAACATGAAGTAGACCAGGAAGAGCACCAACCTTTTCATACTGCTTAG 360 0.4306 MSKKPASIIISKLEEICKRLHLKVRKKDGGLLKLEGSKEGRKGTLGVDAEIFEITPHFHMVELRKSNGDTMEFQKLFKQDIRPALKDIVWTWQGEQPQQEQEQEQHEVDQEEHQPFHTA 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01042 119 CDD CIPK_C 1 86 - -
Pumo5g01042 119 Gene3D Kinase associated domain 1, KA1 1 91 - -
Pumo5g01042 119 MobiDBLite consensus disorder prediction 92 119 - -
Pumo5g01042 119 MobiDBLite consensus disorder prediction 100 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01042 Pumo-Chr5 23230066 23230425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01042 2 98 CBL-interacting serine-threonine protein kinases AT5G58380 64.948 1.45e-41 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01042 K07198 - gmx:100803787 188.734