Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01034 ATGAAGGGATGTGATGCATCTGTATTGTTAAACGACACAGATACTTTCACAGGCGAGAAGACAGCTTTTCCAAACGCCAATTCGTTGAGGGGTTTTGATGTTATAGACAACATAAAATCTCAACTAGAGACCTCATGCGCTGGTGTAGTGTCTTGCGCCGACATCTTAGCAATTGCTGCACAAGACTCTGTTGTTGCTCTGGGTGGACCTACTTGGACAGTTGGTTTAGGAAGAAGAGATTCAACCACTGCAAGTTTAAGTGGTGCTAATTCTGATTTGCCAGCTCCTTTTCTGGATCTTGATGCCCTTATCACTGCTTTTGCCAAGAAAAATTTCACTGCCAATGAGTTGGTTGCTGTCAGGTGTACAACCTTCAGATCAAGGATCTACAACGAAACCAATATAGATTCCTCATTTAAGACATCATTACAAGCAAATTGTCCCAGCACAGGTGGCGATGACAACCTATCCCCATTAGACACCACCACTGAAAACCTTTTTGACAATGCTTTCTTCAAGAATTTGATGAATAAAACTGGTCTCTTGCACTCGGACCAACAACTATTCAATGGAGGTTCAACAGACTCTCTAGTGCAAACTTACATTAGCAACTCATCATTATTTGAAACTGATTTTGCTAATGCAATGGTTAAGATGGGCAACCTTAGCCCACTAACCGGCACTGACGGTCAGATTAGAACCAAATGTTACCAAGTCAATTAA 723 0.4163 MKGCDASVLLNDTDTFTGEKTAFPNANSLRGFDVIDNIKSQLETSCAGVVSCADILAIAAQDSVVALGGPTWTVGLGRRDSTTASLSGANSDLPAPFLDLDALITAFAKKNFTANELVAVRCTTFRSRIYNETNIDSSFKTSLQANCPSTGGDDNLSPLDTTTENLFDNAFFKNLMNKTGLLHSDQQLFNGGSTDSLVQTYISNSSLFETDFANAMVKMGNLSPLTGTDGQIRTKCYQVN 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01034 240 Gene3D - 2 236 - -
Pumo5g01034 240 CDD secretory_peroxidase 3 236 IPR033905 GO:0004601|GO:0042744
Pumo5g01034 240 PRINTS Haem peroxidase superfamily signature 160 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g01034 240 PRINTS Haem peroxidase superfamily signature 50 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g01034 240 PRINTS Haem peroxidase superfamily signature 68 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g01034 240 ProSiteProfiles Plant heme peroxidase family profile. 1 240 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g01034 240 SUPERFAMILY Heme-dependent peroxidases 2 240 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo5g01034 240 PRINTS Plant peroxidase signature 49 59 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g01034 240 PRINTS Plant peroxidase signature 214 227 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g01034 240 PRINTS Plant peroxidase signature 68 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g01034 240 PRINTS Plant peroxidase signature 174 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g01034 240 PRINTS Plant peroxidase signature 30 43 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g01034 240 PRINTS Plant peroxidase signature 158 173 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g01034 240 Pfam Peroxidase 2 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo5g01034 240 Gene3D Peroxidase, domain 2 94 219 - -
Pumo5g01034 240 PANTHER PEROXIDASE 72-RELATED 2 238 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo5g01034 240 FunFam Peroxidase 94 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01034 Pumo-Chr5 23144556 23148035 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g01034 1 240 Peroxidase AT5G05340 58.167 7.67e-102 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01034 K00430 - nnu:104602004 359.377