Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g01030 ATGGCTTCTAGGGAGAAAAGAAGAGAGTCTCTGGAACACACGTTACAACAACTTCGCGATGTCACAAATTCCAATGCTCTGAACAAAGCCTCAATTATTGTAGACGCCTCAAAATACATAGAGGAGTTGAAGCAAAAAGTCGAGGGACTGAACTCAGAGCTGGGGATCACGGAATCATCATCAACCTCTCAAATTGATGAACTACCTATGGTAATTGTGAAAACCCTAAAAAAGGGTTTCCTCATTAATGTGCTTTTAGAAAAGAATTGCCCTGGAATGCTCGTCTCTATACTCGAAGCCTTCGAAGAACTGGGCCTTGATGTGCTTGATGCTAGGGTTTCTTGTGAAGACAGTTTCCAACTAGAAGCTGAGGGAAGAGAAAGTCACAAGAACGACAGTGTTGACGCGCAAGTGGTAAAGCAAGCAGTGTTGCGAGCAATCAAGAACGCGGACTAA 456 0.4364 MASREKRRESLEHTLQQLRDVTNSNALNKASIIVDASKYIEELKQKVEGLNSELGITESSSTSQIDELPMVIVKTLKKGFLINVLLEKNCPGMLVSILEAFEELGLDVLDARVSCEDSFQLEAEGRESHKNDSVDAQVVKQAVLRAIKNAD 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g01030 151 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 148 - -
Pumo5g01030 151 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 6 57 IPR036638 GO:0046983
Pumo5g01030 151 Coils Coil 33 60 - -
Pumo5g01030 151 Coils Coil 1 21 - -
Pumo5g01030 151 Gene3D - 2 59 IPR036638 GO:0046983
Pumo5g01030 151 ProSiteProfiles ACT domain profile. 82 151 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g01030 Pumo-Chr5 23065066 23066953 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g01030 - - gmx:100527466 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g01030 5 23065066 23066953 Pumo5g01030 5 23065066 23066953 ECH
Pumo5g01030 5 23065066 23066953 Pumo1g00310 1 4708396 4709931 ECH
Pumo5g01030 5 23065066 23066953 Pumo9g02252 9 55772379 55773878 ECH
Pumo1g00573 1 8912065 8914086 Pumo5g01030 5 23065066 23066953 ECH
Pumo5g01030 5 23065066 23066953 Pumo1g00573 1 8912065 8914086 ECH