Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00978 ATGGGAGGCTGTTGCAGCCATGATGTTTCTGTTCGAGGGAAGGTGGAGAGCGAGGTGGATGATAGAGAATATGACCATGATCATGAAAATGATGTGTCCTATGAACATGGTGGAGCATTGGTGAGGTTAAGAGGATCCTCTAGGTTTGTATCAATGTACACACAACAGGGTCAGAAAGGTGTGAACCAAGATGCAATGACAGTTTGGGAGGACTATACTGGAGAAAAAGATGTGATCTTTTGTGGCGTGTTCGATGGTCATGGTCCTCTAGGCCACAAGGTTTCACAATTCATTCGTGACAATCTACCCTCAAAACTGTCTGCAGCAATAGAAATTTCACAGCAGAAGACAATCAAATACTATGATGCCAATGATGCAGAAACTGCCAGTTTTGATGATGCCTACGATGACAATAACCACAACATGTCCCTTGCTTCATGGGAGGGATGCTTGCTGAAATCCTTTGATGAGATGGATGAGTACCTTGCTCAGGAAATTAACACTGACAGCTATTGCAGTGGTTGCACCGCTGTGACATTAATTAAACAGGGTAACCAGTTGATAGTTGGCAATTTGGGTGATTCTCGTGCAGTTCTTTGCACAAGGGATAGGGACCAACTAATTCCTGTTCAACTCACAGTTGACTTGAAACCTGATATTCCAAGTGAAACCTCAAGAATTGTTAACTGTGAAGGAAGAGTTTTTGCAGCAGAAGAAGAACCAGATGTATACAGAATATGGATGCCTGATGATGACTGCCCCGGACTAGCCATGTCAAGAGCCTTTGGGGACTTTTGCCTCAAAGATTATGGCCTCATCGCAGTTCCTGATGTATTTTACAGAAAAATTACCCGACAAGATGAATTTGTGGTTTTGGCAACTGATGGGATATGGGATGTGCTCACTAACAGTGAAGTGATAAACATAGTTGCTTCAGCACCAAGGAGGTCCATAGCAGCCAAGTTGTTAGTAAAGCGTGCTGTTAGAGCCTGGAGATACAAGTATCCTGGTTCCAAGGTTGATGACTGTGCTGTCATATGCTTGTTTCTGGATGAACAACCTGTTTTATCACATTCACAATCCTACATGAACAGAAAAAGTAGACAGCGCAGCAAGCACTTGAATCGCAATAAATCCACTAGAAATGAAGACAATGAAACTGTGTATGGCAAGGTCGGGGTGGAACTAGATGAAGAATGGAAGGCCCTTGGAGGGTTTGCAAGAGCCAACTCTCTATCAAAACTTCCTCGCCTTGCTAGGGGTATGAGTAAACGGCAATCATCTAAGTACTATACACCGAGTTGA 1305 0.4345 MGGCCSHDVSVRGKVESEVDDREYDHDHENDVSYEHGGALVRLRGSSRFVSMYTQQGQKGVNQDAMTVWEDYTGEKDVIFCGVFDGHGPLGHKVSQFIRDNLPSKLSAAIEISQQKTIKYYDANDAETASFDDAYDDNNHNMSLASWEGCLLKSFDEMDEYLAQEINTDSYCSGCTAVTLIKQGNQLIVGNLGDSRAVLCTRDRDQLIPVQLTVDLKPDIPSETSRIVNCEGRVFAAEEEPDVYRIWMPDDDCPGLAMSRAFGDFCLKDYGLIAVPDVFYRKITRQDEFVVLATDGIWDVLTNSEVINIVASAPRRSIAAKLLVKRAVRAWRYKYPGSKVDDCAVICLFLDEQPVLSHSQSYMNRKSRQRSKHLNRNKSTRNEDNETVYGKVGVELDEEWKALGGFARANSLSKLPRLARGMSKRQSSKYYTPS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00978 434 ProSiteProfiles PPM-type phosphatase domain profile. 49 350 IPR001932 -
Pumo5g00978 434 SUPERFAMILY PP2C-like 46 352 IPR036457 -
Pumo5g00978 434 CDD PP2Cc 48 350 IPR001932 -
Pumo5g00978 434 Gene3D - 43 352 IPR036457 -
Pumo5g00978 434 SMART PP2C_4 40 348 IPR001932 -
Pumo5g00978 434 Pfam Protein phosphatase 2C 73 327 IPR001932 -
Pumo5g00978 434 PANTHER PROTEIN PHOSPHATASE 47 348 IPR015655 GO:0004722|GO:0006470
Pumo5g00978 434 MobiDBLite consensus disorder prediction 360 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00978 Pumo-Chr5 20880256 20883838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00978 1 354 PP2C-type Phosphatase Gene Family AT5G01700 54.469 8.95e-137 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00978 - - gmx:100783603 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00978 5 20880256 20883838 Pumo5g00978 5 20880256 20883838 ECH