Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00930 ATGCAAAGAAATAATGAAATGATCTTTGTGTGTTTCATCTTGATCTTGATGGTTCTTCTCTTTGTAAAGCTTGAAGCAAGCGTGGATTCAAAAGGTGGGTGCAGGGAGGCACAATGTGGAGATGATGAGCCAGTTGCACGTTTTCCTTTCCGTATCAAAGGCCTCCAACCACAACACTGCGGCTACCCTGGCTTTGAGTTATCATGCTCTAGCTCTAACCACACCCAAACCCTGCTTGAGCTACACGGGTCGTTGAAGTTCATCGTCAAGCGTATTGACTACAAATCACAAACAATTGAATTATATGATCAACATGGATGCTTTCCTAGGCACATTCATGATGACCTCCATCTTTCTCGCTCCCCTTTCCAGTTCAAATCCGACAATTTTAATGACTACACCTTTTTCAATTGTTCGCCAATGGATAGGCATAGGCCATCTATCTTTTCACCGGGCCAAGTAAATAATGACATGCAACATATTCCATGCCTAAGCAGCTCAACCTATGAAGTATATACCATCTTATCCAAAGCAGATATTAGAACCTTGCCCTTATCATCCTGCACCAAAATGTACTACCTTTCATCCCTTCCATCTCTTATATTTGATGACACTTTTCTTTTGCTGTGGCCTGAGCCATCGTGTAAACATTGTGAATCCAAGGGGAAATCATGCCGGTTGAAGGATAATCGTTCCAACAACCAAAGTTCGGAAACTGAATGTTTTGGTAAAGGTACATCAGTGGCAATAGTAATTACAGGTCATTTTTCAATATTATGTTAG 783 0.4125 MQRNNEMIFVCFILILMVLLFVKLEASVDSKGGCREAQCGDDEPVARFPFRIKGLQPQHCGYPGFELSCSSSNHTQTLLELHGSLKFIVKRIDYKSQTIELYDQHGCFPRHIHDDLHLSRSPFQFKSDNFNDYTFFNCSPMDRHRPSIFSPGQVNNDMQHIPCLSSSTYEVYTILSKADIRTLPLSSCTKMYYLSSLPSLIFDDTFLLLWPEPSCKHCESKGKSCRLKDNRSNNQSSETECFGKGTSVAIVITGHFSILC 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00930 260 Pfam Wall-associated receptor kinase galacturonan-binding 34 103 IPR025287 GO:0030247
Pumo5g00930 260 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 9 246 IPR046948 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00930 Pumo-Chr5 19765690 19767236 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00930 34 259 C3H Transcription Factor Family AT2G46495 31.513 2.42e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00930 - - pper:18787035 197.978