Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00913 ATGACTGATGCAGATGCTGCTTCATTTGAGGCATTTCTCCAAGGGTGGATGGTGCGCCAAAGAGGCTACCTTGATGAGCTTCTCTCAGCTCAGCAACACTATCAGGAGATGCAGGATGATGATGTAAGGCAATTGATCAACAGGGTCCTCTGCCACTATGGACAATACTTTGAAGAAAAATCAAAGATTGCCCACAATAATATTCTTCTTGTTTTTTCACCACCATGGTTCAGTTCATTGGAAAGAACCTTTCTTTGGGTGGGGGGGTTCAAGCCCGGAGTGGCTTTTCAGGTTGTGAACACAGCTTTGGAGGACTTGTCAGAAGAGCAAAGGGAGAGGTTGAGTCAGTTCAATCAAGAGACCAAGGTGAAGGAGAGAGCCCTCAATGATGAGTTGGCCAAGCTTCATGAGAGTGTGGCAGCTCCACCGCTGGTGGATATGGCCAGGAGCCATGGCAGGGTGTGTTTCAGCAGGTCCTTCATGGCAGAGGAGGGTTCTGTTCCAAGCACTTTCAAAGACACATTAGAGAATCTGGTGGCAAATGCAGATGCTTTGAGGACAAACACATCTTTGAAGATTTTTCAGATACTGAGACCTGCTCAGATTGTCTCATTCTTGGTTGCTGTGGCTGAGCTTCAGATCAGGATCAGGTCTTGGGGTTTGGACAAGGATGCCCAGAATGCAGGCCAAGGGTGA 696 0.4784 MTDADAASFEAFLQGWMVRQRGYLDELLSAQQHYQEMQDDDVRQLINRVLCHYGQYFEEKSKIAHNNILLVFSPPWFSSLERTFLWVGGFKPGVAFQVVNTALEDLSEEQRERLSQFNQETKVKERALNDELAKLHESVAAPPLVDMARSHGRVCFSRSFMAEEGSVPSTFKDTLENLVANADALRTNTSLKIFQILRPAQIVSFLVAVAELQIRIRSWGLDKDAQNAGQG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00913 231 ProSiteProfiles DOG1 domain profile. 6 226 IPR025422 GO:0006351|GO:0043565
Pumo5g00913 231 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 8 228 - -
Pumo5g00913 231 Coils Coil 100 120 - -
Pumo5g00913 231 Pfam Seed dormancy control 24 100 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00913 Pumo-Chr5 19015963 19016658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00913 7 218 Calmodulin-binding Proteins AT1G77920 28.899 3.23e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00913 - - gmx:100780874 432.565