Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00903 ATGGACATGACTTCCAGTCCCCGCACCGTTGAAGAGATCTTCAAGGACTATAGCGCCAGAAGAACCGCTGTTATTCGCGCTCTCACTCACGACGTTGATGAATTTTACGGCCTCTGTGATCCAGATAAGGATAACCTCTGCCTCTATGGACATCCAAATGAGGCTTGGGAAGTAACTCTGCCAGCGGAAGAAGTTCCGCCAGAGCTCCCTGAGCCGGCTCTTGGAATCAATTTTGCTAGGGATGGCATGAATCGCAGGGACTGGCTTTCTCTGGTTGCTGTGCATAGTGATTCGTGGTTGGTTTCCTGTGGCTTTTTACCTTGGGGCTCGTCTTAA 336 0.506 MDMTSSPRTVEEIFKDYSARRTAVIRALTHDVDEFYGLCDPDKDNLCLYGHPNEAWEVTLPAEEVPPELPEPALGINFARDGMNRRDWLSLVAVHSDSWLVSCGFLPWGSS 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00903 111 PANTHER CPG BINDING PROTEIN 6 105 IPR045104 GO:0006355|GO:0042393
Pumo5g00903 111 Pfam Alfin 9 105 IPR021998 GO:0006355|GO:0042393
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00903 Pumo-Chr5 18861643 18862750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00903 4 102 Alfin-like Transcription Factor Family AT5G05610 77.778 1.62e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00903 K26274 - gmx:100782478 211.46