Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00829 ATGGATGGTCGGCAGTGTGATGTTTATGTCACCCTTAACATTCCCCTAATTGAAGACCAAAACCAACACTGGTATGAAAGAAGCCAAAATTCTGGCACCGATTATTCTAGCAATGGCTCCACATCTTTCCTCAACACTTGTTTCAATGGCCTCAATGCTTTGACAGGTGTTGGGATACTCTCAGTTCCATATGCTCTTGCATCTGGAGGGTGGTTAAGCTTGGTTCTTCTGTTTGCTATTGCCGCTGCAGCATTTTACACAGGCATGTTGATTAAAAGATGTATGGATAAGAATTCGAACATTAGAACCTACCCTGATATAGGCGAGCTTGCATTTGGAAAGACAGGAAGGCTAATAGTATCAGTGTCCATGTACACGGAGCTCTACTTAGTTTCCATAGGGTTCTTGATTCTAGAAGGTGATAACTTGAGTAACTTATTCCCCATTGAGGAGGTTCAGTTTGCTGGCTTAGCAATTGGTGGGAAGCAATTCTTTGTGATATTGGTTTCCCTTGTCATCTTGCCCACAGTTTGGTTGGATAACTTGAGTCTACTTTCTTATGTATCTGCAAGTGGAGTGTTTGCTTCTGCTGTCATCATCCTCTCAATATCATGGACTGCAACATTTGATGGAGTTGGTTTTCATCAAAAGGGAACTCTTGTTAAATGGAATGGGATCCCCACCGCTGTTAGCTTGTATGCCTTTTGTTACTGTGCACATCCCGTCTTCCCCACCTTGTACAATTCCATGACAAACAAACATCAGTTCTCTAATGTCCTACTTGTATGCTTTCTCTTAACCACCGTGGGTTATGCATCCATGGCTATAATTGGTTATCTAATGTTTGGTGCTGACGTTGAATCACAAGTAACATTAAACCTGCCACTGAACAAAGTAAGTTCAAAATTAGCCATATATACTACATTGGTCAATCCCGTATCCAAGTTTGCTTTGATGGCAACACCAATTACCAATGCTTTGAAAGACTTGCTTCCAAGGACGTACAAGAATAGAGTGACCAGCATCTTAGTCAGCACTGTCTTGGTAATAAGCGCTACCATTGTTGCCCTTGCTGTTCCTTTCTTTGGGGATCTCATGTCCCTGGTTGGAGCATTTCTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGTTACTTGAAGATTTCAGGCACTTACAGAAAATTTGGATGTGAAACGGTGGCCATAGTGGCAATAATAGTAGCAGCTATAGCAATGGGAATATCTGGGACGTACACCTCTGTCATGGAAATAGTCCACCATTTGTAA 1290 0.4194 MDGRQCDVYVTLNIPLIEDQNQHWYERSQNSGTDYSSNGSTSFLNTCFNGLNALTGVGILSVPYALASGGWLSLVLLFAIAAAAFYTGMLIKRCMDKNSNIRTYPDIGELAFGKTGRLIVSVSMYTELYLVSIGFLILEGDNLSNLFPIEEVQFAGLAIGGKQFFVILVSLVILPTVWLDNLSLLSYVSASGVFASAVIILSISWTATFDGVGFHQKGTLVKWNGIPTAVSLYAFCYCAHPVFPTLYNSMTNKHQFSNVLLVCFLLTTVGYASMAIIGYLMFGADVESQVTLNLPLNKVSSKLAIYTTLVNPVSKFALMATPITNALKDLLPRTYKNRVTSILVSTVLVISATIVALAVPFFGDLMSLVGAFLSVTASILLPCLCYLKISGTYRKFGCETVAIVAIIVAAIAMGISGTYTSVMEIVHHL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00829 429 PANTHER OS05G0424000 PROTEIN-RELATED 45 411 - -
Pumo5g00829 429 Pfam Transmembrane amino acid transporter protein 40 419 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00829 Pumo-Chr5 16082414 16090516 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00829 27 426 Amino Acid or Auxin Permease AAAP Family AT3G28960 60.100 4.07e-177 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00829 K15015 - gmx:100794374 702.205