Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00827 ATGTCAGAAAAACTTTCGAACTTGAATGTGCCTTTGCTACACGAGGTAGGGCATGCCATAGATGAGGAGAAGAAAGCCATAGCCTCTCATCCTTCTACCGATAATACTGTATCGTTCTTTCGAACCTGCCTTAATGGACTCAATGCAATATCAGGTGTTGGGATACTCTCAGTTCCATATGCTCTTGCATCTGGGGGCTGGTTAAGCTTGTCTATTTTATTTGCTATTGCTGCTGCAGCATTTTACACAGGCTTGTTGATTAAAAGATGCATGGATAAGAATTTGAATATAAGAACCTACCCTGATATAGGTGAGCTTGCATTTGGAAAGACGGGAAGGCTAATAATTTCAGTGTCCATGTACATGGAGCTCTACTTGGTCTCAATAGGGTTCTTGATTCTAGAAGGTGATAACTTGAGTAACTTATTCCCCATTGAGGAGGTTCAGTTAGCTGGCATAGCAATTGGTGGGAAGCAATTCTTTGTGATATTGGTTTCCCTTATCATCTTGCCCACAGTTTGGTTGGATAACTTGAGTATACTCTCTTATGTATCTGCAAGTGGAATATTTGCTTCTGCTTTCATCATCCTCTCAATATCATGGACTGCAACATTTGATGGAGTTGGTTTTCATCAAGAGGGAACTCTTGTTAATTGGAGTGGGATCCCCACAGCTGTTAGCTTGTATGCCTTTTGTTATTGTGCACATCCAGTCTTCCCCACCTTATACAATTCCATGACAAATAAACATCAGTTCTCTAATGTCCTACTTGTATGCTTTCTCTTAACCACTGTGGGTTATGCGTCCATGGCTATAATTGGTTATCTAATGTTTGGTGCTGACGTTGAATCACAAGTAACATTAAACCTGCCACTGAACAAAGTAAGTTCAAACTTAGCCATATATACTACATTGGTCAATCCCGTATCCAAGTTTGCTTTGATGGCAACACCGATTACCAATGCTTTGAAAGACTTGCTTCCAAGGGCGTACAAGAATAGAGCGACCAGCATCTTAGTCAGCACCATCTTGGTAATCAGCACTACCATTTTTGCCCTTGCTGTTCCTTTCTTTGGTGATCTCATGTCCCTGGTTGGAGCGTTTCTAAGTGTCACAGCTTCTATTCTGCTTCCATGCCTGTGTTACTTGAAGATTTCAGGCACTTACCGAAAATTTGGGTGTGAGACGGTAGCCATAGTAGCAATAACAGTAGCAGCTCTAGCAATGGGAATATCTGGGACCTACACCTCTGTCGCGGAAATAGTCCACCATTTGTAA 1278 0.4171 MSEKLSNLNVPLLHEVGHAIDEEKKAIASHPSTDNTVSFFRTCLNGLNAISGVGILSVPYALASGGWLSLSILFAIAAAAFYTGLLIKRCMDKNLNIRTYPDIGELAFGKTGRLIISVSMYMELYLVSIGFLILEGDNLSNLFPIEEVQLAGIAIGGKQFFVILVSLIILPTVWLDNLSILSYVSASGIFASAFIILSISWTATFDGVGFHQEGTLVNWSGIPTAVSLYAFCYCAHPVFPTLYNSMTNKHQFSNVLLVCFLLTTVGYASMAIIGYLMFGADVESQVTLNLPLNKVSSNLAIYTTLVNPVSKFALMATPITNALKDLLPRAYKNRATSILVSTILVISTTIFALAVPFFGDLMSLVGAFLSVTASILLPCLCYLKISGTYRKFGCETVAIVAITVAALAMGISGTYTSVAEIVHHL 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00827 425 Pfam Transmembrane amino acid transporter protein 36 415 IPR013057 -
Pumo5g00827 425 PANTHER OS05G0424000 PROTEIN-RELATED 46 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00827 Pumo-Chr5 16053298 16054984 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00827 20 422 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.621 9.40e-176 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00827 K15015 - gmx:100794374 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00827 5 16053298 16054984 Pumo5g00827 5 16053298 16054984 ECH