LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo5g00826	ATGTCAGAAAAACTTTCCTACAATTCATCCTTGAACGTGCCTTTGCTACCCGAGTGGGAGCATCGTGAGGTGGGGCATGCCATAGACGAGGAGAAACCCACCGAAAACACAGTATCCTTCTTTCGCACCTGCCTTAATGGATTCAATGCAATATCAGGTGTTGGGATACTCTCATGTCCGTATACTCTTGCATCCGGGGGCTGGTTAAGCTTGGTTTTTTTGTTTGCTATTGCCACTACAACATTTTACACAGGCATGTTGATTAAAAGATGCATGGATAAGAATTCGGATATCAAGTCATACCCTGATATAGGCGAGCTTGCGTTTGGAAAGACAGGAAGAGTAATAATATCAATGTTAATATACACGGAGCTTTACATGGTTTCAACAGGGTTCTTGATTCTGGAAGGTGATAACTTGAGTAACTTATTCCCCACTGTGGAGGTTCAGACAGCTGGCTTAGCAATTAGTGGGAAGCAACTATTTGTGATATTGGTTGCTCTTATCATCTTGCCCACAGTTTGGTTGGACAACTTGAGTCTACTTTCTTATGTATCTGCTAGTGGAGCTTTTGCTTCTGTTGTCATCATCCTGTCAATATTATGGACTGCATTAGATGGAGTTGGGTTTCATCAAAAGGGAGTTCTTGTTAATTGGAGTGGAATCCCCACATCTGTTAGCTTGTATGCCTTTTGCTATTGTGCACATCCTGTCTTCCCCACCTTGTACAATTCCATGACAAAGAAACACCAATTCTCTCATGTCATTGCACATAAGGTTTTTTCCAAACCCTTTGCTGTAGTTAGAGGCGATTTTTGA	819	0.4188	MSEKLSYNSSLNVPLLPEWEHREVGHAIDEEKPTENTVSFFRTCLNGFNAISGVGILSCPYTLASGGWLSLVFLFAIATTTFYTGMLIKRCMDKNSDIKSYPDIGELAFGKTGRVIISMLIYTELYMVSTGFLILEGDNLSNLFPTVEVQTAGLAISGKQLFVILVALIILPTVWLDNLSLLSYVSASGAFASVVIILSILWTALDGVGFHQKGVLVNWSGIPTSVSLYAFCYCAHPVFPTLYNSMTKKHQFSHVIAHKVFSKPFAVVRGDF	272

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo5g00826	272	PANTHER	OS05G0424000 PROTEIN-RELATED	47	255	-	-
	Pumo5g00826	272	Pfam	Transmembrane amino acid transporter protein	37	255	IPR013057	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo5g00826	Pumo-Chr5	16038451	16039745	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo5g00826	18	256	Amino Acid or Auxin Permease AAAP Family	AT3G28960	57.083	1.71e-95	285

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo5g00826	K15015		-	gmx:100786627	414.461