Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00822 ATGGACTCAATGCAATATCAGGTGTTGGGATACTCTCAGTGTCCGTATACTCTTGCATCTGGGGGCTGGTTAAGCTTGGTTTTTTTGTTTGCAATAGCCACTGCAACATTTTACACAGGAATGTTGATTAAAAGATGCATGGATAAGAGTTCGAATATCAGAACCTACCCTGATGTGGGTGAGCTTGCATTTGGAAAGACAGGAAGGTTAATAATATCAGGGTTAATATACACGGAGCTCTACTTGGTTTCAATAGGGTTATTGATTCTGGAAGGTGATAACTTGAGTAACTTATTCCCCACTGTGGAGATTCAGACAGCTGGCTTAGTAATTGGTGGGAAACAACTATTTGTGATGTTGGTTGCCCTTATCATCTTGCCCACAGTTTGGTTGGACAACTTGAGTCTACTTTCTTATGTATCTGCTAGTGGAGCTTTTGCTTCTGCTATCATTGTCTTGTCAATATTATGGACTGCAACATTTGATGGAGTTGGATTTCATCATAAGGGAACTCTTGTTAATTGGAACGGAATCCCCACAGCTGTTAGCTTGTATGCCTTTTGCTATTGTGCACATCCAGTCTTCCCCACCTTGTACAATTCCATGAGAAACAAACACCAGTTCTCTGATGTCCTGCTTATAAGCTTTCTGTTAAGCACAGCCGGTTATGCATCCATGGCTATAATTGGTTACCTAATGTTTGGTCCTGAGGTTGAATCACAGGTCACAGTTAAACCTTCCAATAAATAA 750 0.408 MDSMQYQVLGYSQCPYTLASGGWLSLVFLFAIATATFYTGMLIKRCMDKSSNIRTYPDVGELAFGKTGRLIISGLIYTELYLVSIGLLILEGDNLSNLFPTVEIQTAGLVIGGKQLFVMLVALIILPTVWLDNLSLLSYVSASGAFASAIIVLSILWTATFDGVGFHHKGTLVNWNGIPTAVSLYAFCYCAHPVFPTLYNSMRNKHQFSDVLLISFLLSTAGYASMAIIGYLMFGPEVESQVTVKPSNK 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00822 249 PANTHER OS05G0424000 PROTEIN-RELATED 11 243 - -
Pumo5g00822 249 Pfam Transmembrane amino acid transporter protein 15 243 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00822 Pumo-Chr5 15986012 15988083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00822 9 249 Amino Acid or Auxin Permease AAAP Family AT3G28960 57.851 2.81e-98 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00822 K15015 - gmx:100786627 400.593