LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pumo5g00821	ATGTCAGAAGAACTTTCCTACAAATCATCCTTGAATGTGCCTTTACTACCCGAGTGGAATCACCATGATGAGGAGAAAGCCATAGCCTCTCATCATTCTACCAAAAATACTGTATCCCTCTTTCGCACCTGCCTTAATGGACTCAATGCAATATCAGGTGTTGGGATACTCTCAGTTCCATATGCTCTTGCATCTGGAGGGTGGTTAAGCTTTGCACTTCTGTTTGCTATTGCCACTGCAGCATTTTACACAGGTATGTTGATTAAAAGATGCATGGATAAGAATCCGGATATTAGAACCTACCCTGACATAGGTGAGCTTGCATTTGGAAAGACAGGAAGGCTAATAGTGTCAGTGTCCATGTACACGGAGCTCTACTTGGTTTCAACTGGGTTCTTGATCATGGAAGGTGATAACTTGAGTAACTTATTTCCTGTTGGGGAGGTTCAGATAGTTGGGTTAGCAATTGGTGGGAAGCAACTCTTTGTCATATTGGTTACCCTTATCATCTTGCCCACAGTTTGGTTGGATGACTTGAGTCTACTCTCTTATGTATCTGCAAGTGGAGTGTTTGCTTCTGCTGCCATCATCCTCTCAATATCATGGACAGCAACATTTGATGAAGTTGGTTTTCATCAAAAGGGAACTTTTGTTAATTGGAATGGGATCCCCACAGCTGTTAGCTTGTATGCCTTTTGTTATTGTGCACATCCGGTGTTCCCTACCTTGTACAATTCCATGAGAAACAAACACCAATTCTCTACTGTAAGTGCTTTACTAATTTTACATAGTTTGCATGTGTTTTGCTTTTAA	813	0.4133	MSEELSYKSSLNVPLLPEWNHHDEEKAIASHHSTKNTVSLFRTCLNGLNAISGVGILSVPYALASGGWLSFALLFAIATAAFYTGMLIKRCMDKNPDIRTYPDIGELAFGKTGRLIVSVSMYTELYLVSTGFLIMEGDNLSNLFPVGEVQIVGLAIGGKQLFVILVTLIILPTVWLDDLSLLSYVSASGVFASAAIILSISWTATFDEVGFHQKGTFVNWNGIPTAVSLYAFCYCAHPVFPTLYNSMRNKHQFSTVSALLILHSLHVFCF	270

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pumo5g00821	270	PANTHER	OS05G0424000 PROTEIN-RELATED	46	259	-	-
	Pumo5g00821	270	Pfam	Transmembrane amino acid transporter protein	37	269	IPR013057	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pumo5g00821	Pumo-Chr5	15973018	15974016	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pumo5g00821	24	256	Amino Acid or Auxin Permease AAAP Family	AT3G28960	59.227	1.05e-97	290

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pumo5g00821	K15015		-	gmx:100787502	449.899