Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00813 ATGGCGAATTCCCTCGATTTCGGCTCGAAATCGAGGCACCGGAAAACCCCCAATTCCCCTCAGCCTCTGCCATGCCGGCGATCCCGGTCGGCGGTGGTTGACGTCGTGATTTTCGTGGCGGTTGTCGTGGCTTTCGGGTTCTTGCTGTTCCCCTATGCTCAAATTGTGGCCAGTGAGAGTGTCAAAATTGGTGTTGTGATTGTGAATTTGGTCAAAGAGGAGGTTTCTGTTGCCCCTTGGGTTTACATGTTCATAGGTGTCAGTGTCACCTTTGCTGCATTGACTACTTGGGTTCTTGTGGCTTGCACAACAAGGAAGTGTGGGAACCCCAATTGCAAGGGTCTGAGGAAGGCTGCAGAGTTTGACATTCAATTGGAGACTGAGGATTGTGTGAAGAATTCACCTTCATTGGCTAAGGATGGTGGAGTTAAGAAGGGACTGTTTAAGCTTCCTTGTGATCACCACCGCGAACTCGAGGCCGAGCTTAAGAAGATGGCACCCCCCAATGGAAGGGCTGTTCTTGTCCTCAGAGCAAGGTGTGGCTGTTCTGTTGTTCTTAATATCAGACCAGATTTATGCAAGGCTGCTGTTGCTGGACTACCTTTTGTGGATGTTGTGGCATCATTGCTTGATCCAACTATTACTCTCACTACCTCAGAATGGGAGGTTTTCCAGATCAAGCCATTAGGCATGTGGATCAATACACATGTATTCATATGCAGTCTGGTATGGAGGGGGCACATAGAGGCATCATTTGACAATTGTGTCAAAGCTAGCCATAAGAAGATCAAAGGCTGTTTTGCTTCAGGGAATGACAGCAGTGAAAACAACATTGGAGCTGATCTCTCGCCTGACCCAATAACAACTAAAAACAAGCTCATAAAGATCAGTGACAGTGAGTATCTGGTGGAACATCAACATGGTGCTGGTTTTCATAATGAGGTGGAAACAGTTACTGAGTCCAAGAAGAGCAAGGGGCATGAGTGCCCAATTTGCCTCAAGGTTTTTCCATCTGGCCAAGCCTTGGGTGGCCATAAGAGATCTCACGTGACTGGTGGGTCTGAGAGTAGAAGCTTTCAAACAGTTGTGCTTCAGGAACCAGTGGCAGAAATTAGGAACTTCCTTGATCTTATTCTTCCTACTGCTACTGAAGAAGAAAGAAATAGCCATGCTGACTCTAACAGACCCTGGTGGGTAGTAGAAGACAACCATAAACAAGAGGCACTGATCAAGTGCATGGAAGCTACTTTGCTTAGTGCCTTGAGGAGACAAAAAATGGCAGAAACTACAATCTAG 1296 0.4691 MANSLDFGSKSRHRKTPNSPQPLPCRRSRSAVVDVVIFVAVVVAFGFLLFPYAQIVASESVKIGVVIVNLVKEEVSVAPWVYMFIGVSVTFAALTTWVLVACTTRKCGNPNCKGLRKAAEFDIQLETEDCVKNSPSLAKDGGVKKGLFKLPCDHHRELEAELKKMAPPNGRAVLVLRARCGCSVVLNIRPDLCKAAVAGLPFVDVVASLLDPTITLTTSEWEVFQIKPLGMWINTHVFICSLVWRGHIEASFDNCVKASHKKIKGCFASGNDSSENNIGADLSPDPITTKNKLIKISDSEYLVEHQHGAGFHNEVETVTESKKSKGHECPICLKVFPSGQALGGHKRSHVTGGSESRSFQTVVLQEPVAEIRNFLDLILPTATEEERNSHADSNRPWWVVEDNHKQEALIKCMEATLLSALRRQKMAETTI 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00813 431 ProSiteProfiles Zinc finger C2H2 type domain profile. 327 349 IPR013087 -
Pumo5g00813 431 PANTHER OS05G0488500 PROTEIN 10 184 - -
Pumo5g00813 431 Pfam C2H2-type zinc finger 327 349 - -
Pumo5g00813 431 ProSitePatterns Zinc finger C2H2 type domain signature. 329 349 IPR013087 -
Pumo5g00813 431 MobiDBLite consensus disorder prediction 1 26 - -
Pumo5g00813 431 Gene3D alpha/beta hydrolase 184 222 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00813 Pumo-Chr5 15886834 15893784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00813 261 385 C2H2 Transcription Factor Family AT1G26610 44.882 8.01e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00813 - - gmx:100790204 317.775