Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00791 ATGGCAGCTTGCATATTCACGGTGTCACAGGACGGAACCGCAGACTTCCAAACGGTGCAGGAGGCAATCGACGCCGTGCCGTTCGGCAACACTCGCCGGACGGTGATTCGGGTGTCGCCGGGAGTCTACCGGCAACCGGTGTACGTCCCCAAGACCAAAAATTTCATCACTCTCGCCGCTCTCAGCCCTGAGGACACTGTGCTTACCTGGAACAACACTGCCACCGGAATCGATCACCACCAACCTGCGAGGGTGATAGGGACTGGGACGTTTGGTTGTGGAACTACCATTGTGGAAGGGGAGGACTTTATTGCTGAGAATATTACTTTTGAGAATTCTGCGCCTGAGGGTTCAGGGCAAGCAGTTGCAATTAGAGTAACAGCAGATCGATGTGCCTTCTACAATTGCAGGTTCCTTGGATGGCAGGACACACTGTACTTACATTATGGTAAACAATATTTGAAAGATTGCTACATTGAAGGAAGTGTGGACTTCATCTTTGGCAATAGCACTGCTCTTTTGGAGCACTGCCATATCCACTGCAAGTCTGCAGGCTTCATAACTGCACAGAGCAGAAAATCATCGCAGGAAACAACTGGTTATGTATTCCTGAGATGTGTTATCACAGGTAATGGAGGAAATTCATATGCATATCTTGGACGACCGTGGGGTCCTTTTGGAAGGGTGGTCTTTGCATACACTTACATGGATCAATGTATAAGGCATGTTGGCTGGGATAACTGGGGGAAAATGGAGAATGAGAGAAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCCGGTTGCTGTCCACCCAAACGAGTAACATGGTGTAGAGAATTGTTGGATGAAGAAGCAGAGCAGTTCCTCACGCATCCTTTCATTGATCCAGAACCAGAGAAACCTTGGCTTGCTCAAAGAATGGCCCTCAGGATTCCATATTCTGCTTGA 951 0.4837 MAACIFTVSQDGTADFQTVQEAIDAVPFGNTRRTVIRVSPGVYRQPVYVPKTKNFITLAALSPEDTVLTWNNTATGIDHHQPARVIGTGTFGCGTTIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSSQETTGYVFLRCVITGNGGNSYAYLGRPWGPFGRVVFAYTYMDQCIRHVGWDNWGKMENERSACFYEYRCFGPGCCPPKRVTWCRELLDEEAEQFLTHPFIDPEPEKPWLAQRMALRIPYSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00791 316 Gene3D - 3 310 IPR012334 -
Pumo5g00791 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Pumo5g00791 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Pumo5g00791 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 298 - -
Pumo5g00791 316 FunFam Pectinesterase 2 309 - -
Pumo5g00791 316 SUPERFAMILY Pectin lyase-like 3 298 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00791 Pumo-Chr5 15605327 15607793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00791 5 309 Carbohydrate Esterase AT5G47500 37.580 1.97e-69 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00791 K01051 - gmx:100795636 658.292