Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00786 ATGGATGGAGCAGCAGCAGCTAGCCAAGGTAGTGGTGCAGGCCCGGACATGTTTCTAGCAAATTATAAATTGGGAAAAACACTTGGCTTTGAATCCCTGGGCAAGGTGAAAATTGCAGAACATGTATTGACTGGCCAGAAGGTTGCCATCGAGATCCTTAACCGTAGCAAGATAAAGAACATGGAAATGGAAGAACAAGGCATAGGTGGCGCTGCTGGTGCTGATCGGAAGCGTGGTCACCGGCCACCGCGCGATAAGCTAGCTCACCGAACACTCTTACTTCATCTAGGATGTAGTCCTCTCCTCCAATGGCCAGTTCGCCCTCTCCGGCTCTTGGGAATGCTAGCTTCACCTCTGGGACCTTGCCGTCGACACCTCTGCGCACCGATAATCTATGGTGTGGAGTATTGTCATAGCAACATGGTAGTTCATAGAGATTTGAGGCCTGAAAACATACTTTTGGACTTCAAATGTGATGTTAAGATTATTGGATTTGGTTGGAGCGACATCATGCGTGGTGGTCACTTTCTTAAGACAAGTTATGAAATCCCTAATTATGTAGCTCCTGAGGTTATCTCTGGGAAATTGGATAATGGACCTGAAGTTGACATATGGAGTTGTGGTGTAATTTTATATCTTCTTCTTTGTGGCACTCTACCTTTTGATAACGATAACATTCAAAATCTCTTCGACAAAATAAAGACACTTGTATTCAAGGATCAACGGCCAAATGGCTTACATCATCCAAAACCAAAGACTTTATAA 765 0.4444 MDGAAAASQGSGAGPDMFLANYKLGKTLGFESLGKVKIAEHVLTGQKVAIEILNRSKIKNMEMEEQGIGGAAGADRKRGHRPPRDKLAHRTLLLHLGCSPLLQWPVRPLRLLGMLASPLGPCRRHLCAPIIYGVEYCHSNMVVHRDLRPENILLDFKCDVKIIGFGWSDIMRGGHFLKTSYEIPNYVAPEVISGKLDNGPEVDIWSCGVILYLLLCGTLPFDNDNIQNLFDKIKTLVFKDQRPNGLHHPKPKTL 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00786 254 Gene3D Transferase(Phosphotransferase) domain 1 117 251 - -
Pumo5g00786 254 Gene3D Phosphorylase Kinase; domain 1 15 74 - -
Pumo5g00786 254 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 20 63 - -
Pumo5g00786 254 Pfam Protein kinase domain 124 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00786 254 SMART serkin_6 22 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00786 254 ProSitePatterns Tyrosine protein kinases specific active-site signature. 142 154 IPR008266 GO:0004672|GO:0006468
Pumo5g00786 254 SUPERFAMILY Protein kinase-like (PK-like) 17 236 IPR011009 -
Pumo5g00786 254 ProSiteProfiles Protein kinase domain profile. 22 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00786 Pumo-Chr5 15545506 15555841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00786 19 238 CBL-interacting serine-threonine protein kinases AT4G24400 40.529 2.07e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Pumo5g00786 Pkinase 1.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00786 K07198 - gmx:100779991 240.736