Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00775 ATGCGATCGCCAGAGAAAGAGAACCATGTGGTGGAAATTCCCACCCCACAAAGAGAAGACACTGATATCACCCTCCATGCCATGGTTCTCGGTTCCAATGTGGTCTTTCCTGCAGCTCTCAACGCTGCAATTGAGCTCAACGTCTTTGAGATCATTGCAAAGGAGAGCTCAGAAGAGAGTGGTGGATTCATGTCACCCCATGAAATTGCTTCCAAGTTATTATTACCAACGCAAGAACAACACTCTGACTTGCCAAATAGGCTTGAACGTTTGTTGCGCTTGCTTGTTAGCTACTCTCTTCTCACTGTTTCCACTCGCACCAATGAGGATGGTAGCACTGTGAGAGTTTATGGGGTCTCACCATCGGGTAAATATTTTGTCTATGATGAAAATGATAATGGTGGTGGTTATCTCGCTTCATTCACTTCATTTCTGTGTCACCGTGCATTATCCGGGGTGTGGCTTAATTTTAAGGAAGCGGTTATTGATCCTGAGATTGACCTTTTCAAGAAGGTTCATGGAATGTCTAAGTTCGAGTACTTTGGGAAAGAACCAGAACTGAATCACGTATTTAACAAAGCAATGGATGATATATGCACAACCCATATGAAAAAAATACTTGAAGTATACACAGGATATGAGGGCATATCAACTTTGGTTGATGTAGCAGGCGGAACTGGACAATGTCTCAAATTGATCATCTCCAAATACCCTTCAATTAAGGGGATTAATTTTGACCTCCCACATGTGATTGAAAATTCACCACCCATTCCAGGGGTTGAGCATATTGGGGGGAATATGTTTGAAGGTGTTCCACAGGGTGATGCCATAATGCTAAAGGCTATATGCCATAATTGGTCGGATGAAAAAGCCATAGAAATTTTAAGCAATTGTCACAAAGCTTTGCCACCAAACGGGAAGGTCATTGTTGGGGATCTCATACTGCCAGAAGATCCAGAACCTACAAATGATTATAAAATGATTTCAATTCTTGATAACATCATGTTTATTACACCTGGTGGAAGGGAAAGAACTGAGAAACAATTTGAGAGCTTGGGCAAGCGTTCTGGATTTTCTAGGTTTCAAGTTGTTTGTCGTGCTTTCTCTACTATGGCAGTGATGGAATTTTACAAATAA 1137 0.4151 MRSPEKENHVVEIPTPQREDTDITLHAMVLGSNVVFPAALNAAIELNVFEIIAKESSEESGGFMSPHEIASKLLLPTQEQHSDLPNRLERLLRLLVSYSLLTVSTRTNEDGSTVRVYGVSPSGKYFVYDENDNGGGYLASFTSFLCHRALSGVWLNFKEAVIDPEIDLFKKVHGMSKFEYFGKEPELNHVFNKAMDDICTTHMKKILEVYTGYEGISTLVDVAGGTGQCLKLIISKYPSIKGINFDLPHVIENSPPIPGVEHIGGNMFEGVPQGDAIMLKAICHNWSDEKAIEILSNCHKALPPNGKVIVGDLILPEDPEPTNDYKMISILDNIMFITPGGRERTEKQFESLGKRSGFSRFQVVCRAFSTMAVMEFYK 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00775 378 SUPERFAMILY "Winged helix" DNA-binding domain 20 130 IPR036390 -
Pumo5g00775 378 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 378 IPR016461 GO:0008168
Pumo5g00775 378 PIRSF O-mtase 6 378 IPR016461 GO:0008168
Pumo5g00775 378 Pfam O-methyltransferase domain 154 359 IPR001077 GO:0008171
Pumo5g00775 378 Gene3D Vaccinia Virus protein VP39 188 367 IPR029063 -
Pumo5g00775 378 PANTHER O-METHYLTRANSFERASE 27 368 IPR016461 GO:0008168
Pumo5g00775 378 Pfam Dimerisation domain 39 96 IPR012967 GO:0046983
Pumo5g00775 378 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 137 375 IPR029063 -
Pumo5g00775 378 Gene3D - 35 206 IPR036388 -
Pumo5g00775 378 FunFam Caffeic acid 3-O-methyltransferase 4 126 - -
Pumo5g00775 378 FunFam Caffeic acid O-methyltransferase 132 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00775 Pumo-Chr5 15444631 15446997 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00775 17 368 Monolignol Biosynthesis Gene Families AT5G54160 48.725 4.13e-111 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00775 - - gmx:100798295 683.715