Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00772 ATGCCCAACACCTTCTCCTCTCTCCTTCGGTGGATTGGCAAAAAGTTGCGACGAAGGAACTCAATTATCAATGGAGATAGTAGCAGCGACAGCATCCACAACGGTGGCAACGCTGTTGCCACCGCTGTGGATGACAATCCATTTGGCAGCGGGGTGGAGTGTTACGCCTGCACGCAGGTAGGCGTGCCGGTGTTCCACTCCACCAGCTGCGATAGCGCCTTCCACCAACTACAGTGGGAGGCTTCTGCTGGGTCCTCACTTGTTCCTATCCAGAATCGGCCCAGCAGCAAGGTCTCCGGCTTTCGGACCGTGTCCGGTTCGAACCGGGGACCGTTTGGACGGGTTCTGGATCCGCGGAGCAAGCGCGTGCAGAGGTGGAACCGCGCGCTGCTGCTGGCGCGTGGGGTGGCGCTGGCGATAGACCCGCTGTTCTTCTACGCGCTGTCGATCGGGAGGGAGGGCTCGCCGTGTCTGTACATGGACGGCGGGCTTGCGGCGATGGTGACGGTGGCGCGCACGGGACTGGCGTACGTGTCGCGAGAGTCACTGGTGGTTGGATGTGGGAAACTCGTGTGGGACGCGCGTGAGATCGCGTCGCATTACCTGCGATCGTTGAAGGGTTTCTGGTTCGACGCATTCGTGATCCTTCCGGTTCCCCAGGCTGTGTTTTGGTTGATAGTGCCAAAATTGATAAGAGAAGAGAAAATTAAAATCATTATGACAATAATGCTATTGATTTTTTTGTTCCAATTTCTCCCCAAGGTTTACCATAGCATCTGCATGATGAGAAGAATGCAAAAAGTCACAGGCTACATCTTTGGCACCATTTGGTGGGGCTTTGGCCTCAATCTCATAGCTTATTTTATTGCTTCTCATGTTGCTGGAGGGTGCTGGTATGTCCTTGCAATTCAACGTGTTGCGTCGTGCCTCCGGCAGCAGTGTGAGAGAACTCATGGATGCAATCTTTCTGTGTCATGCTCAGAGGAGATATGCTACCAGTCTTTGTTACCAGCAAGTGCAATAGGAGATTCATGTGGTGGAAACTCAACATTGGTAAGAAAGCCTTTGTGCTTAGATGTTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTCCAGTCATATCCAGTAACTCTTTGGCTGTCAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACCCTCAGCACTTTCGGAAATGATCTTGAACCCACAAGTAACTGGCTAGAAGTGATCTTCAGTATATGCATCGTACTCAGTGGACTATTGCTTTTCACATTATTGATTGGTAACATCCAGGTATTCTTACATGCAGTCATGGCAAAGAAGAGAAAGATGCAGCTGAGATGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGTTGCCATCGCGATTAAGACAAAGAGTTCGCCATTTTGAACGTCAGAGATGGGCTGCCATGGGAGGAGAAGATGAGATGGAAATGATCAAAGATTTGCCCGAGGGGCTGAGGAGGGACATCAAGCGCCATCTTTGCCTTGATCTCATTAGAAAGGTTCCTTTATTCCACAACTTGGATGATCTTATTCTTGACAACATCTGTGACAGAGTGAAGCCCCTAGTCTTCTCTAAAGATGAAAAGATAATCAGAGAAGGTGATCCTGTACCAAGGATGGTGTTCCTCGTCCGAGGGCGCATAAAACGCAACCAAAGTCTGAGCAAAGGCATGGTAGCCTCAAGCATCCTTGAGCCAGGAGGGTTTTTAGGCGACGAGCTACTTTCATGGTGCCTTCGTCGGCCGTTTATTGACAGACTTCCGGCCTCCTCGGCCACATTTGTGTGTCTTGAATCAGCCGAAGCCTTTGGCCTTGATGCTGATCACTTGAGGTACATCACTGATCACTTCCGGTACAAATTTGCCAATGAGAGGCTGAAGAGAACAGCAAGATATTACTCATCCAATTGGAGAACCTGGGCTGCTGTCAACATTCAATTTGCTTGGAGACGTTACAGGCAGAGGACTAGAGGTCCAGTGACACCTGTAAGGGACAATAATGGAGGCACTGAACGCAGGCTCTTGCAATATGCTGCAATGTTCATGTCAATAAGGCCACATGACCACCTTGAATGA 2115 0.4988 MPNTFSSLLRWIGKKLRRRNSIINGDSSSDSIHNGGNAVATAVDDNPFGSGVECYACTQVGVPVFHSTSCDSAFHQLQWEASAGSSLVPIQNRPSSKVSGFRTVSGSNRGPFGRVLDPRSKRVQRWNRALLLARGVALAIDPLFFYALSIGREGSPCLYMDGGLAAMVTVARTGLAYVSRESLVVGCGKLVWDAREIASHYLRSLKGFWFDAFVILPVPQAVFWLIVPKLIREEKIKIIMTIMLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERTHGCNLSVSCSEEICYQSLLPASAIGDSCGGNSTLVRKPLCLDVEGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMEMIKDLPEGLRRDIKRHLCLDLIRKVPLFHNLDDLILDNICDRVKPLVFSKDEKIIREGDPVPRMVFLVRGRIKRNQSLSKGMVASSILEPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESAEAFGLDADHLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTRGPVTPVRDNNGGTERRLLQYAAMFMSIRPHDHLE 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00772 704 CDD CAP_ED 516 626 IPR000595 -
Pumo5g00772 704 Gene3D Helix hairpin bin 442 507 - -
Pumo5g00772 704 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 103 669 - -
Pumo5g00772 704 SUPERFAMILY Voltage-gated potassium channels 118 437 - -
Pumo5g00772 704 Gene3D - 182 439 - -
Pumo5g00772 704 Gene3D Jelly Rolls 514 632 IPR014710 -
Pumo5g00772 704 Pfam Ion transport protein 190 434 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pumo5g00772 704 ProSiteProfiles cAMP/cGMP binding motif profile. 516 626 IPR000595 -
Pumo5g00772 704 SMART cnmp_10 516 642 IPR000595 -
Pumo5g00772 704 SUPERFAMILY cAMP-binding domain-like 443 630 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00772 Pumo-Chr5 15426262 15432267 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00772 9 704 Ion Channels AT5G15410 74.621 0.0 1023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00772 K05391 - gmx:100798823 1297.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00772 5 15426262 15432267 Pumo5g00772 5 15426262 15432267 ECH