Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00742 ATGCCATTTCGCTGTCACCTGACTATGAGCCCTGGTACAGAAGAAGATAGCAGAAGCCAGGGATCTCCAAGTAGAGTTTCCTCAATGGCCCTCCACTTCCGATCAATCGCTTCAATCTTGGAAAGCAACCTTGAGGAGAAGTCCAAGTTATACAAAGAAGTCTCCTTGCAGCACTTGTTCTTAATGAACAACCTACATTATATGGCTGAAAAGGTTAAGGGGTCTGAACTCAGGCTCATATATGGAGATGAATGGATTCGAAAGCGCAACTGGAAGTTTCAGCAGCATGCAATGAAATATGAGAGAGCTAGTTGGAGTTCCATTCTCAACTTGCTTAAGGATGAGGGAATTCATGTTCCAGGTACAAATTCAGTCTCAAAAAGTCTTCTTAAAGACAAGCTACGAAGCTTCTACCTCGGCTTTGAGGATGTTTACAGGATCCAGACAGCTTGGATTATCCCAGATATTCAGCTTCGCGAAGATTTGCGGATTTCTATATCCCTCAAAGTAATCCAAGCTTATAGGACGTTTGTTGGAAGGCACAACAGTCACATAAGTGACAAAAACATTAAGTACACTGCTGATGATTTAGAAAACTACCTTTTGGATTTCTTTGAAGGATCTCAAAAGTGGTTGCAAAATCCTCATAGGAGGTGA 657 0.4186 MPFRCHLTMSPGTEEDSRSQGSPSRVSSMALHFRSIASILESNLEEKSKLYKEVSLQHLFLMNNLHYMAEKVKGSELRLIYGDEWIRKRNWKFQQHAMKYERASWSSILNLLKDEGIHVPGTNSVSKSLLKDKLRSFYLGFEDVYRIQTAWIIPDIQLREDLRISISLKVIQAYRTFVGRHNSHISDKNIKYTADDLENYLLDFFEGSQKWLQNPHRR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00742 218 SUPERFAMILY Cullin repeat-like 20 206 IPR016159 -
Pumo5g00742 218 Pfam Exo70 exocyst complex subunit 17 202 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo5g00742 218 PANTHER EXOCYST COMPLEX PROTEIN EXO70 24 207 IPR004140 GO:0000145|GO:0006887
Pumo5g00742 218 Gene3D Exocyst complex component Exo70 6 209 - -
Pumo5g00742 218 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00742 Pumo-Chr5 15003715 15004371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00742 13 218 EXO70 exocyst subunit family AT3G29400 51.887 7.67e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00742 K07195 - gmx:100799102 401.749