Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00741 ATGGCTGTAGAGGAGTCTGAGCCTGTGATTGGGGAGCTAGAAAGGGAGGAGAACTTGATTGCTGCAGTAAGGCATATTGTGAAGGCATTGGGGCCAAATAAGACCCTTACTAGTGATGCCAAGAAAATTCTGGCAGATCTTGGCACTAGGTTGTCCTCCATGTCCATACCCAGTGACAAGGAGGAAGGGAAACAAGGGCAAGGGGAGGATGATGGTGATGATCATGATGGCGGTGGTGATCTTTATGATGATGATGAGGGTGTTAGTGCTATTGAAGAAAGGCTTAATGTGATTCAGGAGAGAATTATGAGATGGGAGGAAGATCTGTCCATGATTTGGGATTTGGGGCCAGAGGAAGCATCTGAGTATCTGAATGCTGCTAATGAAGCCCGCCGGTTGATTGAGAAGTTAGAAAGTTTGCATTTGAAGAAAGAGGATCAAGAGTACAAGTTTATGCAGAGGGCTTATAGTGTTCTTCAAACGGCTATGGCACGGCTTGAAGAAGAATTCAGGAACTTGCTTATCCAGAACAGGCAACCTTTTGAGCCTGAATACGTCTCTTTTCGCTCTAATGAGGAAGATGCTGTCGATGAGAATTCCATAGTCTCTTTAGGTGATGAATCAGTTGAGGAATCACTTCAAAGAGATAGTGTCAGCAGAGCTTCTGAGGAGCATATCATTGATTTGGTTCATCCAGCCGTGATCCCGGATCTCAGGTGTATTGCAAACTTACTTTTTGCTTCCAATTATGTCCAGGAATGTTCCAATGCTTATATCATTGTCCGAAGGGATGCCTTAGATGAGTGCCTCTTCATTCTTGAAATGGAAAGGCTCAGCATCGAGGACGTCTTGAAAATGGAGTGGGGTACTTTGAATTCAAAAATCAAAAGATGGATTTGGGCTGTGAAAATCTTTGTTAGGGTTTATCTTGCAAGTGAGAGGTGGCTTGGTGACCAGATTTTTGGGGAGGGTGAGCCTGTTAGTCTAGCTTGTTTTGTTGATGCATCTAAGGCTTCGATATTGCAGCTTCTGAATTTCGGTGAAGCCATGTCCATTGGCCCTCACCAACCTGAAAAATTGTTCCGCGTTCTTGACATGTATGAGGTTCTACAAGACCTTATGCCAGACATTGATGCTTTGTATTCAGATGAGGTTGGTTCCTCAGGTTAA 1170 0.441 MAVEESEPVIGELEREENLIAAVRHIVKALGPNKTLTSDAKKILADLGTRLSSMSIPSDKEEGKQGQGEDDGDDHDGGGDLYDDDEGVSAIEERLNVIQERIMRWEEDLSMIWDLGPEEASEYLNAANEARRLIEKLESLHLKKEDQEYKFMQRAYSVLQTAMARLEEEFRNLLIQNRQPFEPEYVSFRSNEEDAVDENSIVSLGDESVEESLQRDSVSRASEEHIIDLVHPAVIPDLRCIANLLFASNYVQECSNAYIIVRRDALDECLFILEMERLSIEDVLKMEWGTLNSKIKRWIWAVKIFVRVYLASERWLGDQIFGEGEPVSLACFVDASKASILQLLNFGEAMSIGPHQPEKLFRVLDMYEVLQDLMPDIDALYSDEVGSSG 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00741 389 MobiDBLite consensus disorder prediction 52 86 - -
Pumo5g00741 389 Coils Coil 120 147 - -
Pumo5g00741 389 Coils Coil 88 108 - -
Pumo5g00741 389 SUPERFAMILY Cullin repeat-like 107 383 IPR016159 -
Pumo5g00741 389 Pfam Exo70 exocyst complex subunit 296 383 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pumo5g00741 389 Coils Coil 149 176 - -
Pumo5g00741 389 Gene3D Exocyst complex component Exo70 105 388 - -
Pumo5g00741 389 PANTHER EXOCYST COMPLEX PROTEIN EXO70 87 382 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00741 Pumo-Chr5 15002336 15003505 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00741 12 388 EXO70 exocyst subunit family AT3G29400 46.053 3.86e-99 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00741 K07195 - gmx:100799102 690.649