Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00725 ATGGTTTGGGATATGCAAGTTCCAGAAGATGCTACTAGAGGCTTGTTTCAGTTGTCTCGTTCAGATATTGAAAAGATCAAGCAATTTGTGGTGTCCAAGAAGAAAGGGAATAAGAGCAAGCTTCACTTGTCAACGGGAGTAGTCAAAGACCCCAATGAACTAGGAGCAATATATGTCAGTGATTGGTTGAAGCATGGTGGACCCAACAACAGAAGCCTCACGGTTTGGGATAAGCAAGTTTCAGAAGATGCAACTAGAGGCTTGTTTCAATTGTCTCGTTCAGATATTGAAAAGCTGAAGCAAATTGTGGTGTCCAAGCAGAAAGGGAACGCCAACCTTCACTTGTCAACGTTTGTGTTATGTGTTGCCTATGCATTGGTTTGCAGAGTGAAAGCAGAAGAAGTCAAAAGTAAAAGAGTTGTTTTGGGTGTGAATGTTGATTGCAGGCGTCGGTTGGAGCCACCTATTCCTCCAACATATTTTGGAAACTGTGTAGTTTGCAGACTTGCAATTATTGAAACAAGAGAATTGTTGGGGGAGGATGGACTAATTGTGGCTGTGGAAGCACTGAGTGAAGCTTTGGAAACCCTGAAGGATGGTGTGCTGAATGGAGCAGAAACTTTGTTGTCGTCGGTGCTTGATAGTTTCGCCATTGATGACAAGTTAATTGGCACTGCTGGGTCACCGAGGTTTGAGGCTTACAGTAGTGACTTTGGTTGGGGAAGGCCAAAGAAGGTGGAGATGGCTTCTATAGACAGAACTGGGGCATTTTGTTTATCAGATAGCAGAAATGGTGATGGGGTTGAGATAGGTTTTGTGTCCAAGAAAAGAGCAATGGAGACCTTTGCTTCTCTTTTTGTCAATGGCCTTCAATCTTGA 879 0.4346 MVWDMQVPEDATRGLFQLSRSDIEKIKQFVVSKKKGNKSKLHLSTGVVKDPNELGAIYVSDWLKHGGPNNRSLTVWDKQVSEDATRGLFQLSRSDIEKLKQIVVSKQKGNANLHLSTFVLCVAYALVCRVKAEEVKSKRVVLGVNVDCRRRLEPPIPPTYFGNCVVCRLAIIETRELLGEDGLIVAVEALSEALETLKDGVLNGAETLLSSVLDSFAIDDKLIGTAGSPRFEAYSSDFGWGRPKKVEMASIDRTGAFCLSDSRNGDGVEIGFVSKKRAMETFASLFVNGLQS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00725 292 Pfam Transferase family 89 284 - -
Pumo5g00725 292 Gene3D - 81 292 IPR023213 -
Pumo5g00725 292 PANTHER - 44 291 - -
Pumo5g00725 292 SUPERFAMILY CoA-dependent acyltransferases 78 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00725 Pumo-Chr5 14740785 14751532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00725 78 282 Monolignol Biosynthesis Gene Families AT5G48930 23.982 1.12e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00725 - - gmx:100805184 386.726