Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00724 ATGGTTTGGGATCTGCAAGCTCCAGAAGATGCAACTAGAGGCTCATTTCAATTGTCTCGTTCAGATACTGAAAGGCTGAAGCACATTGTGGTGTCCAAGCAGAAAGGGAACACCAACCTTCACTTGTCAACGCTTGTGTTATCTGTTGCCTATGCATGGGTTTGCAGGGCGAGAGCAGAGGAAATGAAAAACAAGAGAGTTATGTTGGCTCTAACTGTTGATTGCAGGGGTCACTTGCAATTGTTGAAACGAGAGAATTGTTGGGGGAAAGATGGACTAGTTGTGGCTGTGGAAGCACTGAGTGATGCATTGGAAACTTTGAAAGATGGAGTGCTGAGTGGAGCAGAAAATTGGTCATCGTGGTTGCTTAATGGTGTGGGAGGTGAAGCTGATGTCAAAACAATTGGAGTTGCAGGGTCACTGAGGTTTGAGGTTTACAGTAGTGACTTTGGTTGGGGAAGACCCAAGAAGGTGGAGATGGTGTCTATTGACAGATCTGGGGCATTTTGTTTATCAGATAGCAGAAGTGGTGATGGGGTTGAGATAGGTTTTGTGTCCAAGAAAAGAGCAATGGAGACCTTTGCTTTTCTTTTTGTCAATGGCCTTGACTCTTAA 615 0.4488 MVWDLQAPEDATRGSFQLSRSDTERLKHIVVSKQKGNTNLHLSTLVLSVAYAWVCRARAEEMKNKRVMLALTVDCRGHLQLLKRENCWGKDGLVVAVEALSDALETLKDGVLSGAENWSSWLLNGVGGEADVKTIGVAGSLRFEVYSSDFGWGRPKKVEMVSIDRSGAFCLSDSRSGDGVEIGFVSKKRAMETFAFLFVNGLDS 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00724 204 PANTHER - 8 203 - -
Pumo5g00724 204 Gene3D - 6 204 IPR023213 -
Pumo5g00724 204 Pfam Transferase family 124 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00724 Pumo-Chr5 14736568 14737234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00724 8 198 Monolignol Biosynthesis Gene Families AT5G48930 24.186 1.51e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00724 - - gmx:102660160 276.559