Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00721 ATGAGAACTTCAAAGTTGATGCAATCCTTGAAAGTTTCTCAAGACAGCAATGGAGAATGCACCACCAACTCTGGTTATATAACAGTGACTGGGAGCCCCAGATTACAAAAGAAGTTTGGTTTGGAGAGGTGTTCACGACCAACCAGTCCGTCATTGGATTCCAGAATTAACAGAAGAGAGCACAATGGGCAACCTGTGGAATTGTCTTCTCCAAGTACAACACCAAGACATAAGTTCTCCACTTTGCAGCAAAGAAATGAACGTTTCAGTGAGATCAGCTGTCACTGGAGGGATTTTAAGCATCATGTTAACATCATTTCGGATTTTGACGACAAAAGCAGCTCGGCCAGTCATAGTGAGATTGAAGTCATTCGCATTGATCAATCTGGAAAGATCATTAGCTCCTCCATTCAGCTGAGTGGCATGAATCAAAATAATGCATTTGAAGAGTTGAGGAAGGCTGAGACAATGATTACTGCAGAACAACCAAGCCCTGTGTCTGTTCTTGATGCTGCATTCTATAGGGATGATCCACCATCTCCAGTGAGAAAGAAATCAGATATCTCAAAAAATTTAGGTGAAGCTCTAAGCACTGATGAGGATAGTGAAGAGAGCTTAGTGGATCTACTTCAAGAAATTGACTGGATTGATGAGAAACTCATCAATTTCAGTAACACTAGGGATCCTGACCATAAACAAAGGGGCAGTTTTAACATTGAAGACAGTGCCAAGAAGATTCCCAGGATTATTAACCCTGAGCAAATGCAAAGAAAACTCATATTTGATGTTGTCAATGACATTTTAGTTCAAAAGCTAATATTGGATAGTTCTTCTGCATTGTGGTGCCAACCAAATGAGTTAGCAGGCACAGCACTAAAAGGGAAGCTGCTTTTGGATGAGCTATGCACAGAAATTGATCAGTTGCAACCTCAAAATAGGAAAGTCAGTTTAGTTCATGAGGATGAGAATTTGAAGCATCACCATGCAATTTGGACTAACTGCTGCAATGAGATGCCAAATATTGTGTTGGATATTGAACGTCTGATCTTTAAAGATTTGATAACTGAGGTTGTGAGAGGTGAAGTAGCAAACCATCCTGGTACACATTGCAGGCAACTGTCAATCTTCATAAATACATGA 1140 0.4026 MRTSKLMQSLKVSQDSNGECTTNSGYITVTGSPRLQKKFGLERCSRPTSPSLDSRINRREHNGQPVELSSPSTTPRHKFSTLQQRNERFSEISCHWRDFKHHVNIISDFDDKSSSASHSEIEVIRIDQSGKIISSSIQLSGMNQNNAFEELRKAETMITAEQPSPVSVLDAAFYRDDPPSPVRKKSDISKNLGEALSTDEDSEESLVDLLQEIDWIDEKLINFSNTRDPDHKQRGSFNIEDSAKKIPRIINPEQMQRKLIFDVVNDILVQKLILDSSSALWCQPNELAGTALKGKLLLDELCTEIDQLQPQNRKVSLVHEDENLKHHHAIWTNCCNEMPNIVLDIERLIFKDLITEVVRGEVANHPGTHCRQLSIFINT 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00721 379 MobiDBLite consensus disorder prediction 43 77 - -
Pumo5g00721 379 Pfam Domain of unknown function (DUF4378) 251 356 IPR025486 -
Pumo5g00721 379 MobiDBLite consensus disorder prediction 63 77 - -
Pumo5g00721 379 PANTHER LONGIFOLIA PROTEIN 247 373 IPR033334 GO:0051513
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00721 Pumo-Chr5 14703140 14704903 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00721 253 378 TRM (TON1 Recruiting Motif) Superfamily AT1G18620 33.333 1.51e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00721 - - gmx:102660880 670.618