Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00720 ATGTCTGGAAAGGCTTTGAAATCCTTGAAGGATGAAAACCCAGATTTGCAGAAGCAAATTGGATGCATCACTGGATTTTTTCAACTCTTTGACCGCCACCGTTTCCTCACAGGCCAACGCTCTGGCACCTACATTCAGCACAGGCCTACTTCAGGTGGAAGCAGTAACGAAATCAAAGAGCTCAATGGTACAATGCAGAAAGCTAAGGCAAAGAATCTGAAGACTGCTAGAGGAAAGCAACAATTCTCCACAGAATCATCCATAACTTCGTTGTCTTCATCATCTTGTTCATCTAGCGTGTCATCCCTTGAGTTTAGCAGAACAATTCAGATACAAACACCATCAAGAAATCGAATCAGAATTCCAGAAAACACAAATTCAAAAGTAGCAAAGAAGCAACCTGATACCCCACACCAGCAATCCCAGCATTTCCATCACATTGTCAAAGACTCAATGCATAAAGAAGCTCGAGGATTGTCTGTGAAAACTGTGGCCAAAGAGGAAAAGAAGGGTCAGACTAATGCCTTGAAACACATAGACTCCCCCAGGCCTTTACGGTCACACAAATCTGTCAATGCAGGAGTTACAGTTGCCAGCGAACCATTACATACTCTTGCCAAGTCAAAGAAAAAACCTTGGGACTCGCCACGGCTCTCTTATGATGAAACATTCAAATTTGCCACAAAGCATAAGGAACTCCCAAGGCTTTCTTTGGACAGCAGAGAAGTGTCCAATAGAAGTTTCAATGAAGGAAACAAGTCTCAAAACCTGTTAAAGGGTTCACCGAAAGGGTACGGGAGAAAGTCCAGCACAATGATCAACCAGCTGCAAGAACCAGAAACTTCCAAAAGGTCTTCCAGTGTTGTAGCTAGGTTGATGGGACTTGAAGCCCTCCCAGACTGTACACAAACTTGTGGGAGTCCAATGGGAACTTCTAGTTGCTCTACCAAAAAGAATGAGCTCTTGGCAAGATCTAGCACAAGTGATGAAGACAAGCAACACCAAAGATTCACCTTGCCTCACTCTAGAAAGGCTGATTCAATCACAAATGTGACACCATATTCACGATTTGCACTAGAACCAACTCCGTGGAGGCAACCTGATACAAGCCAAATCCCTCAATCACAAGCTTCCAAGGGAAGTGAATCTGATATAAAATCCTCAAAATCCTCTCTCACTGTATATGGGGAAATTGAGAAAAGGGTGGCAGAACTAGAGTTCAAAAAGTCTGGAAAGGATCTCAGAGCCCTTAAACAGATTCTTGAAGCAATGCAGAGACATAAAGATTCATCAGACATTGCTAGAGATCAGGCTTCAAATTCTCCATCTGAAAGTAGGAATAGTACTAATCTCAATGAAAGCTCAAAATTACAAAGCCCAAAGTACGACAAAAAGATCCGGCATCTGTCACGGTTGAGATGTCAAATTCAACCCGAGGTAGTAAATTGCCAATTGTCATCATGA 1464 0.4269 MSGKALKSLKDENPDLQKQIGCITGFFQLFDRHRFLTGQRSGTYIQHRPTSGGSSNEIKELNGTMQKAKAKNLKTARGKQQFSTESSITSLSSSSCSSSVSSLEFSRTIQIQTPSRNRIRIPENTNSKVAKKQPDTPHQQSQHFHHIVKDSMHKEARGLSVKTVAKEEKKGQTNALKHIDSPRPLRSHKSVNAGVTVASEPLHTLAKSKKKPWDSPRLSYDETFKFATKHKELPRLSLDSREVSNRSFNEGNKSQNLLKGSPKGYGRKSSTMINQLQEPETSKRSSSVVARLMGLEALPDCTQTCGSPMGTSSCSTKKNELLARSSTSDEDKQHQRFTLPHSRKADSITNVTPYSRFALEPTPWRQPDTSQIPQSQASKGSESDIKSSKSSLTVYGEIEKRVAELEFKKSGKDLRALKQILEAMQRHKDSSDIARDQASNSPSESRNSTNLNESSKLQSPKYDKKIRHLSRLRCQIQPEVVNCQLSS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00720 487 MobiDBLite consensus disorder prediction 358 391 - -
Pumo5g00720 487 MobiDBLite consensus disorder prediction 244 259 - -
Pumo5g00720 487 MobiDBLite consensus disorder prediction 364 391 - -
Pumo5g00720 487 MobiDBLite consensus disorder prediction 267 285 - -
Pumo5g00720 487 MobiDBLite consensus disorder prediction 302 346 - -
Pumo5g00720 487 Pfam DUF761-associated sequence motif 287 300 IPR032795 -
Pumo5g00720 487 MobiDBLite consensus disorder prediction 304 322 - -
Pumo5g00720 487 MobiDBLite consensus disorder prediction 244 285 - -
Pumo5g00720 487 MobiDBLite consensus disorder prediction 425 464 - -
Pumo5g00720 487 PANTHER LONGIFOLIA PROTEIN 3 463 IPR033334 GO:0051513
Pumo5g00720 487 MobiDBLite consensus disorder prediction 323 341 - -
Pumo5g00720 487 MobiDBLite consensus disorder prediction 435 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00720 Pumo-Chr5 14699751 14702936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00720 1 426 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 32.000 3.62e-36 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00720 - - gmx:100808151 764.992