Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00715 ATGTATGGGAGCACCGAAAAAAAACTTAAGCAGTTCAAGAACGAAATTGAGTTGCTCTGCCAGCTTTGTCATCCAAACTTGGTCACTCTGTTAGGATTTTGTGACCACAAAGACGAGAAGATTATAGTATATCAGTACATGGCCAATAGATCTCTCCATCATCACCTATATTGTAGTGATGCGAAAAAGGAACCACTAACATGGAAGCAGAGGCTAAAGATCTGCATAGGAGCAGCACATGGACTGCACTACCTTCACACAGGAGCCAAGCGAACCATCTTTCACCGTGACATAACACCTTATAATATTCTTTTGGATAGCAACATGGTGACCAAGCTCTCAGACTTCCAGGTTTCCTTAACAGGACCGCATTATGCGGCAAAGCCAAAACAAAAGACAATATCAAAAGATGGCTTTATAGATGTTGAGAAGAGGCAGAAGCACCCTGTTGAGGAGAATATTGATCTGAATCTCAAAGGAAAGATTGCACCAGAGTGTTGGCAAGTATTTATGGATATCACGGAAACATGCTTGAATTTTGATCCAAATGAGCGGCCAGCAATGGGTGAAGTGGAGAAGATCTTCATAGGAGCAGTGCATGGACTACATTACATTCACACTGGAGCTACACGCACGATCTTTCAGCATGCAGCCAATATCCTGCAACATCTTAGCCCTTCATTAGTCATTGCACAGGAATCAAGGAAGAGAGAAAACATAATGAATGGTTCTGATTTTAGCTATAGAGAAAATTTTGATGGAGAGATCCATGTTTTGGATAACAACGTGGTGCCTGAACTCTCAGAATTTGGCTTTTCCTTATAA 825 0.4145 MYGSTEKKLKQFKNEIELLCQLCHPNLVTLLGFCDHKDEKIIVYQYMANRSLHHHLYCSDAKKEPLTWKQRLKICIGAAHGLHYLHTGAKRTIFHRDITPYNILLDSNMVTKLSDFQVSLTGPHYAAKPKQKTISKDGFIDVEKRQKHPVEENIDLNLKGKIAPECWQVFMDITETCLNFDPNERPAMGEVEKIFIGAVHGLHYIHTGATRTIFQHAANILQHLSPSLVIAQESRKRENIMNGSDFSYRENFDGEIHVLDNNVVPELSEFGFSL 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00715 274 ProSiteProfiles Protein kinase domain profile. 1 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00715 274 Gene3D Transferase(Phosphotransferase) domain 1 130 195 - -
Pumo5g00715 274 Gene3D Transferase(Phosphotransferase) domain 1 49 129 - -
Pumo5g00715 274 PANTHER OS07G0166700 PROTEIN 146 192 IPR045272 GO:0004714|GO:0006468
Pumo5g00715 274 Gene3D Phosphorylase Kinase; domain 1 1 48 - -
Pumo5g00715 274 ProSitePatterns Tyrosine protein kinases specific active-site signature. 93 105 IPR008266 GO:0004672|GO:0006468
Pumo5g00715 274 Pfam Protein tyrosine and serine/threonine kinase 4 122 IPR001245 GO:0004672|GO:0006468
Pumo5g00715 274 SUPERFAMILY Protein kinase-like (PK-like) 5 201 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00715 Pumo-Chr5 14584131 14585591 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00715 5 191 Receptor kinase-like Gene Family AT1G30570 37.021 1.87e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo5g00715 PK_Tyr_Ser-Thr 5.9e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00715 - - gmx:100779112 327.791