Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00709 ATGGACACAAGTGGCACACGAATTGCTTTAGGAACCATCTTACTCCTGTTGTTGTGCCTTTACCTTTCCACAGCAGAGGTTTTTTATCGTCCCACTGAGCTCTTGAGCGTCAACTGTGGTGGCTCATCTACCAACTTGTCCACCCCCGATGGTCGAAATTGGATTGGAGACATGAAATTCCTCTCAGAAAAACACGACTCAGTTGCTGCTCCACCACTCACACAATCAACGATACAGGGCCCTTACACCTTAGCTCGTCTCTCTCACTCCAATTTCACTTACTCAGTCCCTGTCACCCCAGGCACCCCAAAGTTCATTCGCCTCTTCTTCTACTCAACTTCGTACCAAAACTTTAATCGCTCCAAAGCCTATTTCTCAGTCAAAGCAGGCCCATACACTCTCCTTCACGATTTCAATGCTTCCCTCAATGCTGATGTTAACGCTGTTGACGACCCTGCCTTCCCCGACATCTTGATGAGAGAGTATTGCATCAACCTCGAAGATGGTCAGAGGCTCAACATAACCTTCATTCCAAGCACCACATATTCGTACGCTTTCATCAATGGAATCGAGATTGTTTCAATGCCCTCTTATCTCTACTACACCAATTCTAACGACATCACTGGAATCCCGCTACTTCTTAGCACCACGACCCAATACCCCATCGAAAACAAATTTGCTCTCCAGACAATGCACCGGTTAACCGTTGCAGGAAAAGAAATCCCCCCTTCAGGGGACACGGGTATGCTCAGGACCTGGAATCCGGATGGCAAATACCTAACTACTCTAAGTGGACCAGCTGTTGATTTTGGGCGTAGAACTAAGCTGAGCTTCACTATGACTCCAAACTACACTGCACCTGACGAAGTGTACCGATCCTCAAGGAATATGGGACCTAATGGCACCTTCAACATGGAGTTCAACCTCACATGGCAGCTTCCCGTTGATTCTGGCTTCACCTACTTGGTAAGGTTACACTTTTGCCAGCTTGCCCCGGATGTTGAGAAGCCCGGTGACCTGAGATTCTGCATCTTCATAGCGGATCAGTTGGCTACCGATTGGGCAGACGTTCTCTTCTGGACCAAACAGAAGGGTGTTCCCGTGTTTAGAGACTACGCAGTTTTCATCCCAGAGAATCCGAAAAAAGTTAACCTGTCACTGAAATTGCATCCTCACCCCGAAAGCTTGATCCCGGACGCACGAATAAACGCAATTGAAGTCTTCAAAATCAGCAATGCTACACGTAGTCTCGCTGGACCAAACCCAGACCCTCCTCCTGCTCTAACCCCCGTGGTTCCCCATCAAAGCTCAAAAAAGAAAAGCAGCGGCTCCAAGAAAACCCTTGCCGCCGTGGCAGGTGCGCTCTCCGGTGTCGTTTTGCTCTCTTTTATTGTCGTTTTCTTCCTCATCAAACGCAAGAAGAACGTTTCCGTTGACAAGGGTTCCAACCAAAAAGACGGAACTTCTCGCGGGGGTGGCTCATCATCGCTACCAACCAACCTCTGCCGCCACTTTTCAATCGCAGAAATCAGAGCCGCCACCAACAACTTTGACGAACTCTTAGTGGTTGGCGTCGGAGGTTTTGGCAACGTGTACAAAGGCTATATCGACGATGGTTCAACATGTGTCGCAATCAAAAGGCTCAAACCGGGTTCTCAGCAAGGTGAGCAGGAGTTCATGAATGAGATTGAAATGCTCTCTCAACTTCGTCATCTACATCTCGTTTCCCTTATCGGTTACTGTTACGAGAGCAACGAGATGATACTAGTTTACGATTTCATGGATCGCGGAACCCTCCGTGACCATCTTTACGGCACCGATAACCCTTCGCTCTCATGGAAGCAAAGGCTTCAGATCTGCATAGGTGCTGCACGGGGACTGCATTATCTGCATACAGGTGCGAAGCACATGATCATTCACCGCGACGTGAAGAGCACCAACATATTATTGGATGAAAAATGGGTGGCCAAAGTTTCAGACTTCGGGTTATCCCGAATTGGACCCACGGGTTCTTCAATGACCCATGTTAGCACTCAGGTGAAAGGCAGTGTTGGATATTTAGACCCGGAGTACTATAAACGACAGCGTTTAACCGAGAAGTCTGACGTGTACTCCTTTGGGGTGGTGCTGTTAGAGGTATTGTCTGGGAGACAGCCTTTGCTCCGTACGGTGGAGAAGCAACAGGTGTCACTGGTTGATTGGGCGAAGCATCTCTATCACAAGGGTTCTCTGGGTGCGATTGTGGATCCAACACTGAAGGGCCAGATAGCACCCCACTGTTTGCACAGATTTGGTGAGGTTGCACTGAGCTGTTTGCTTGAGGATGGGACCCAGCGACCTTCCATGAACGACGTCGTTGGGGTGTTGGAGTTTGTTCTGCAGCTTCAAGATAGTGCTGTTAATGGAGTGGTACCTTTGGTGATGAGTGGTGGGGATTATGAAGATAGTGAGGACATGTTTAGCAGTACCCATAGTGGTATACAACTTTCGGATTATAGTAACAGCACTGGATTGAACACCACAAGCCATAGGAGTACGGAATCTGACAGGTTGATCCCGGAGAATGTTTTCTCTGAGATTAAGGATCCAAAGGGACGATGA 2601 0.4844 MDTSGTRIALGTILLLLLCLYLSTAEVFYRPTELLSVNCGGSSTNLSTPDGRNWIGDMKFLSEKHDSVAAPPLTQSTIQGPYTLARLSHSNFTYSVPVTPGTPKFIRLFFYSTSYQNFNRSKAYFSVKAGPYTLLHDFNASLNADVNAVDDPAFPDILMREYCINLEDGQRLNITFIPSTTYSYAFINGIEIVSMPSYLYYTNSNDITGIPLLLSTTTQYPIENKFALQTMHRLTVAGKEIPPSGDTGMLRTWNPDGKYLTTLSGPAVDFGRRTKLSFTMTPNYTAPDEVYRSSRNMGPNGTFNMEFNLTWQLPVDSGFTYLVRLHFCQLAPDVEKPGDLRFCIFIADQLATDWADVLFWTKQKGVPVFRDYAVFIPENPKKVNLSLKLHPHPESLIPDARINAIEVFKISNATRSLAGPNPDPPPALTPVVPHQSSKKKSSGSKKTLAAVAGALSGVVLLSFIVVFFLIKRKKNVSVDKGSNQKDGTSRGGGSSSLPTNLCRHFSIAEIRAATNNFDELLVVGVGGFGNVYKGYIDDGSTCVAIKRLKPGSQQGEQEFMNEIEMLSQLRHLHLVSLIGYCYESNEMILVYDFMDRGTLRDHLYGTDNPSLSWKQRLQICIGAARGLHYLHTGAKHMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPTGSSMTHVSTQVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLSGRQPLLRTVEKQQVSLVDWAKHLYHKGSLGAIVDPTLKGQIAPHCLHRFGEVALSCLLEDGTQRPSMNDVVGVLEFVLQLQDSAVNGVVPLVMSGGDYEDSEDMFSSTHSGIQLSDYSNSTGLNTTSHRSTESDRLIPENVFSEIKDPKGR 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00709 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Pumo5g00709 866 ProSitePatterns Protein kinases ATP-binding region signature. 523 546 IPR017441 GO:0005524
Pumo5g00709 866 Gene3D Phosphorylase Kinase; domain 1 481 593 - -
Pumo5g00709 866 Pfam Protein tyrosine and serine/threonine kinase 523 787 IPR001245 GO:0004672|GO:0006468
Pumo5g00709 866 PANTHER OS03G0124300 PROTEIN-RELATED 13 476 IPR046957 GO:0004672
Pumo5g00709 866 MobiDBLite consensus disorder prediction 831 852 - -
Pumo5g00709 866 Gene3D Transferase(Phosphotransferase) domain 1 594 803 - -
Pumo5g00709 866 SMART serkin_6 517 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00709 866 MobiDBLite consensus disorder prediction 831 846 - -
Pumo5g00709 866 Gene3D - 32 196 - -
Pumo5g00709 866 Gene3D - 226 412 - -
Pumo5g00709 866 Pfam Malectin-like domain 37 410 IPR024788 -
Pumo5g00709 866 CDD STKc_IRAK 532 790 - -
Pumo5g00709 866 FunFam FERONIA receptor-like kinase 226 411 - -
Pumo5g00709 866 SUPERFAMILY Protein kinase-like (PK-like) 494 792 IPR011009 -
Pumo5g00709 866 MobiDBLite consensus disorder prediction 416 443 - -
Pumo5g00709 866 FunFam Receptor-like protein kinase FERONIA 594 804 - -
Pumo5g00709 866 ProSiteProfiles Protein kinase domain profile. 517 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00709 866 FunFam Receptor-like protein kinase FERONIA 490 593 - -
Pumo5g00709 866 FunFam FERONIA receptor-like kinase 34 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00709 Pumo-Chr5 14229982 14233081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00709 29 866 Receptor kinase-like Gene Family AT3G51550 48.358 0.0 740
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo5g00709 Malectin_like 3.7e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00709 - - gmx:100814046 1254.2