Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00703 ATGTTTGGGCTTCAGCAGTTGGAAGCACACAAGTTCATCTCAAAGACAGTATCCAACGTTAGGCGATTTATTGTGAAAGACACTCAATCATTGAAAGAGTTCAAGAATGAAATAGAGTTGCTCTGCCAGCTTCGCCATCCTAATTGTATCTCTCTTAAAGGATTCTGCAACGACGAAAATGAGAATATTGTGGTATACGAGTACATGTCTAATGGATCTCTCTATCAACGTCTACGTGAGAATACAGAAGCGCTGTCATGGAAGAAAAGGCTAGAGATTTGCATAGGAGCAGCTCGTGGACTACACTACCTTCATGCTGGAGCCAAGCGCACCATCGTTCACCGTCACATCTGTCTTGCAAACATTCTTTTGGATGACAACATGGAGCCAAAACTTGCTGAGTTCCGCTTTAGCGTACAGGGAGCACATTTTATGTCAAAGCCAAAACCAATTAAAGCTGAACTTGAGGGTATTCTGGGGTACACAGCTGCAGAGAATTTCACGGTTGGTATCATTACAGATAAATCTGATGTTTTCTCATTTGGTATGGTTCTACTATATGTAGCGTGTGGAGGGACAGGTGTAAAAAAGAAACCAGAAAGAAAAATTTTTGAGGAGCCTGTTGAGGAGAATATTGATCCCAAAATCAAAGGAGAGATTGCACCAGAGTGTTGGGAAGTCTTTATAGATATCATCCAAAGATGTGTGAAGTATGAACCTGATGGACGACCAACAATGGGTGAAGTCGAAGTGGAACTTGAGCATGCTCTGTCGTTGCAAGAACAAGCAAGTATCACAAACACCAATGGTCATTATACCTTATTCTCCAAAACCATTATTAACCATTAA 849 0.4122 MFGLQQLEAHKFISKTVSNVRRFIVKDTQSLKEFKNEIELLCQLRHPNCISLKGFCNDENENIVVYEYMSNGSLYQRLRENTEALSWKKRLEICIGAARGLHYLHAGAKRTIVHRHICLANILLDDNMEPKLAEFRFSVQGAHFMSKPKPIKAELEGILGYTAAENFTVGIITDKSDVFSFGMVLLYVACGGTGVKKKPERKIFEEPVEENIDPKIKGEIAPECWEVFIDIIQRCVKYEPDGRPTMGEVEVELEHALSLQEQASITNTNGHYTLFSKTIINH 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00703 282 Gene3D Phosphorylase Kinase; domain 1 9 69 - -
Pumo5g00703 282 PANTHER OS07G0166700 PROTEIN 19 260 IPR045272 GO:0004714|GO:0006468
Pumo5g00703 282 PIRSF ILK 13 270 - -
Pumo5g00703 282 Gene3D Transferase(Phosphotransferase) domain 1 70 278 - -
Pumo5g00703 282 ProSiteProfiles Protein kinase domain profile. 1 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00703 282 Pfam Protein tyrosine and serine/threonine kinase 27 251 IPR001245 GO:0004672|GO:0006468
Pumo5g00703 282 SUPERFAMILY Protein kinase-like (PK-like) 21 257 IPR011009 -
Pumo5g00703 282 FunFam Receptor-like protein kinase ANXUR2 69 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00703 Pumo-Chr5 13864977 13866321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00703 20 261 Receptor kinase-like Gene Family AT5G59700 40.157 3.10e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo5g00703 PK_Tyr_Ser-Thr 4.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00703 - - gmx:100305395 350.517