Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00702 ATGCTTCTGGGTAAGAGACAAGTAATTGGAACAATGCTTCTCAAATGTTTGGGCTTCTTCCGTTCCAAGCACACAAGTTCATCTCAGAGAAAGTATCCAACAATAATAGAAGAGTTGTGCCATCAGTTTTCTCTGGCCGATATTAGGAAATCAACCAACAATTTTGATCAAAACAGAGTAATTGACCTTAGAGCATTTGGTATCAAAATATATAAAGGTTGTCTTCAACATAATGATGGTTCTGATTATACAGTTGCAGTAAAGCGATTTAAAGTGAAAGACAGTCAAGCATGGGAAGTGTTCAAAAACGAAATTGAGTTGCTCTGCCAGCTTCGTCACCCTAATTGTGTCTCTCTGGTAGGATTCTGCAACCAGAAAGATGAGAAGATTATTGTGTACGAGTACATGTCCAATGGATCTCTATATGAACAGCTACAAGGTGGGGAACTGTCATGGAAGAAAAGGCTAGAGATCTGCATAGGAGCAGCGCGTGGACTACACTACCTTCACGCTGGAGTCAAGCGCACCATCATTCACCGTCACATCAAACCTAGCAACATTGTTTTGGATGATAACATGGAGCCAAAACTCACAGATTTTGGCATTAGTGTACAGGGACCGCATTTTATGTCAAAGCCAAAACCAATTAAAGTAGATTCTGTTGTGGGTACTTTTGGCTACCTGGCTATGGAGCATCTCTTGGACCTTACCGTCACAGATAAAACTGATGTTTACTCATTTGGTATGGTTCTACTAGAAGTTGTGTGTGGAAGGAGCTATCTAAAAATGGTAGCAGAAACAGAATTTGAGGAGGAAACCTGTGGTCTTGAGGAGAAAATTGATCCGAATATCAAAGGAAAGATTGCACCAAAGTGTTGGCAAGTCTTTATAGATATCACCCAAGGATGTGTGACATATGAAGCAGATGAGCGACCAACAATGGGTGAAGTGGAGGTGGAACTTGAGCATGCTCTGTCGTTGCAGGAACAAGCAGATATCACAAACACCAATGGAGAATATACCTTATTGTCCAAAACCATTATTAACCGAAAACCGGAATGGGAATTAGAGCATCCTTTGTCATTGCACCAAGAAGAAGATATCATAGAAGAAAGTGACTTAGGAGACATGTTTCCTTAG 1140 0.407 MLLGKRQVIGTMLLKCLGFFRSKHTSSSQRKYPTIIEELCHQFSLADIRKSTNNFDQNRVIDLRAFGIKIYKGCLQHNDGSDYTVAVKRFKVKDSQAWEVFKNEIELLCQLRHPNCVSLVGFCNQKDEKIIVYEYMSNGSLYEQLQGGELSWKKRLEICIGAARGLHYLHAGVKRTIIHRHIKPSNIVLDDNMEPKLTDFGISVQGPHFMSKPKPIKVDSVVGTFGYLAMEHLLDLTVTDKTDVYSFGMVLLEVVCGRSYLKMVAETEFEEETCGLEEKIDPNIKGKIAPKCWQVFIDITQGCVTYEADERPTMGEVEVELEHALSLQEQADITNTNGEYTLLSKTIINRKPEWELEHPLSLHQEEDIIEESDLGDMFP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00702 379 PANTHER OS07G0166700 PROTEIN 39 328 IPR045272 GO:0004714|GO:0006468
Pumo5g00702 379 SUPERFAMILY Protein kinase-like (PK-like) 30 324 IPR011009 -
Pumo5g00702 379 FunFam Receptor-like protein kinase ANXUR2 136 343 - -
Pumo5g00702 379 Gene3D Phosphorylase Kinase; domain 1 17 135 - -
Pumo5g00702 379 Pfam Protein tyrosine and serine/threonine kinase 65 319 IPR001245 GO:0004672|GO:0006468
Pumo5g00702 379 Gene3D Transferase(Phosphotransferase) domain 1 136 347 - -
Pumo5g00702 379 ProSiteProfiles Protein kinase domain profile. 55 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00702 379 FunFam Receptor-like protein kinase ANXUR2 20 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00702 Pumo-Chr5 13861925 13863426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00702 17 332 Receptor kinase-like Gene Family AT3G51550 41.493 9.06e-76 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo5g00702 PK_Tyr_Ser-Thr 5.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00702 - - gmx:100812131 585.104