Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00701 ATGGCTCACACAGTGAAGGTGATAGAACAGTGTGAAGTGAGTCCTCCGCCAGGTTCGGTTCCTTCAACCTCTATCCCTCTCACTTTCTTTGATCTTCCATGGCTATGTTGCCCCCCACTCAAACGTATTTTCTTCTATGAATTCCCTTATTCCACCCAACACTTCTTCCAAACTCTCCTTCCAAATCTCAAGCTCTCTCTTTCCCTCACTCTCCAACACTTCTTCCCTTTCTCTTCCAACCTTGTCTTCCCTCCAAAGCCAAACCCCCCTCACATCCTCTACACACAAGCAGATTCTATCTCCTTCACCGTAGCAGAGTCCACTGCAGATTTCACCACCCTTGTCTCTGATTCCCCAAAAGATGTCACCCTTTTGCACCCTTTTGTTCCTTTGTTGCCTCCACCACGTACCTTAGAAGATGGCACGTTTCTTATCCCTCTCATGGCCATTCAGGTCACTGTTATGTCCCATTCTGGCTTCACCATATGCTTCACTTTCAGACACGTGGCTGCAGATGGGAGAGCTTTTCATCACTTCATGAAATTCTGGGCCTCCATTTGTAAGTCCAAAGGAGACTTGGGCTTGGCTTCCCTTCAAGGCTCTCTTGCTCTGCCATTGCACAATAGGCACATCATTCAAGACCCAAAAGGCCTCAAGCGCATTTTCTTAGAAGAATTGTGGAATTTGTTACCGGAAAATGTAGAGTCCAAGGGTGAAATACGTGATGTTCCTAGTGACATGGTGCGTCACATGTTTGTCTTGAGCCATGACCATGTTGAGAAACTCAAGAAATGGGTCTCTATTAAATGCAAAAGCCATGGTCTAGCAATACCGCACTTAACAACCTTTGTGGTAACATGTTCTTTGATTTGGGTTTGTAAGGTGAAATCAGAAGAGGCTAAAGTTGGTACCATACTTCCCACTAATGATGAGTCCTACATCTTGGCCTTTATGGCAGATTGTCGTAATCTTCCGGAATGTTCAATTCCATTGGAATATTTTGGCAATTGTTTGGTTTGTGGCAATGCTGAAGTCAAGAGGAGCAAGCTTGTTGGAGAAAATGGTATTTTGGAGGCAGCCATAGCTATTGGTAGTGAAGTTAGACATTTGCAACGTGAAACTTTTGAAGGGGCTGAAACATTGATGTCAAATTTTACAGAATTTGCCACGGTGGGGAAGCATATGACAATACTTGCAGGCTCACCAAATCTGGAAGTGTATGAAACTGACTTTGGGTGGGGAAAGCCCAAGAGGAGTGAAGTAGTTCATGTAGATAATTCAGGAACAATCTCCCTTTCTGACTGTAGAGACAAAGAAGGTCGAATTGAAGTTGGGATAGCACTTCAAAAGATTCAAATGAATAAATTCAGTTCCATTTTGGAAGAACACCTTACAGAAATTGCAGTTCTTGACTGA 1416 0.4371 MAHTVKVIEQCEVSPPPGSVPSTSIPLTFFDLPWLCCPPLKRIFFYEFPYSTQHFFQTLLPNLKLSLSLTLQHFFPFSSNLVFPPKPNPPHILYTQADSISFTVAESTADFTTLVSDSPKDVTLLHPFVPLLPPPRTLEDGTFLIPLMAIQVTVMSHSGFTICFTFRHVAADGRAFHHFMKFWASICKSKGDLGLASLQGSLALPLHNRHIIQDPKGLKRIFLEELWNLLPENVESKGEIRDVPSDMVRHMFVLSHDHVEKLKKWVSIKCKSHGLAIPHLTTFVVTCSLIWVCKVKSEEAKVGTILPTNDESYILAFMADCRNLPECSIPLEYFGNCLVCGNAEVKRSKLVGENGILEAAIAIGSEVRHLQRETFEGAETLMSNFTEFATVGKHMTILAGSPNLEVYETDFGWGKPKRSEVVHVDNSGTISLSDCRDKEGRIEVGIALQKIQMNKFSSILEEHLTEIAVLD 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00701 471 Gene3D - 243 466 IPR023213 -
Pumo5g00701 471 Pfam Transferase family 17 461 - -
Pumo5g00701 471 PANTHER - 5 465 - -
Pumo5g00701 471 Gene3D - 4 237 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00701 Pumo-Chr5 13859933 13861474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00701 43 462 Monolignol Biosynthesis Gene Families AT5G48930 21.379 8.85e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00701 - - gmx:100782335 842.417