Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00700 ATGGCCAACGAGGTGAACCACCATCGCACGTTGAACATCATAGAGCAGTGTCAAGTTACTCCACCGTTAGGTTCTGTTCCTGCAACCACCATTCCTCTAAGCTTCCTCGACCTTCCATGGCTATACTGCGCCCCAGTGAAACGAATCTTCTTCTACCACTTCCCTCACTCCACACACCACTTCCTTCAAACCGCGCTTCCCTCTCTCAAACACTCTCTTTCACTCACTCTCCAACACTTCTTCCCCTTCGCCGCGAACGTCGCTTTCCCTCCCAAGCCACACGCGCCTCACATTGTCTATTCCCAAGGCGACTCCGTCTCTTTCACTGTTGCGGAATCCACTTCGGACGTCGACAACCTCGTATCCGATTCCCCAAGAGATGTTCGACACGTGTACCCTTTTGTTCCTACGCTTGCCTCGCCACGTGTCTTGGAAGATGGCACGTTGTTGGCCCCGTCTATGGCCGTTCAGGTCACGGTTTTCGACAACAAGGGATTCAGCGTGTGTGTCACTTTCAGGCACGCCATTGCCGATGGTAGAGCGTTTCATCACTTCATGAAATTTTGGGCCTCCGTTTGTGGGGCCAGAGGGGACAACAAGGCTTCTTCTCTTGAAGCCCATCTTGTTCTCCCGTTGCATGACAGGGACATGGTTGAAGACTCAATTGGGCTTAGGCCCATTTTCTTGGAGGAACTGTGGAATTCGCCACCGAGAATAATAGAACCCACGTGCCCCATTTATGATGCTCCTAGCAATAGCGACATGGTGCGTCACAGAATTATTCTAAGTTGTGACCAAGTTGAAAGGCTAAAGAAATGGGTGGGTATTAAATGTGAAGGCATTGGTCTAGAGACATTGCACTTGTCAACCTTTGTGGTGACATGTTCTTTGATTTGGGTATGCAAGGTAAAATCAAAAATCGTTTTTACCGATGTAACTGATCCCAAGGATGATGGTTGTTACTGCTTGACATTCCTAGCGGATTGTCGTAACCGTTCCGAGCTTTCGGTTCCATCCACTTACTTCGGAAATTGCTTGACTATTTGCCACGTGGAACTCCAGAGGGAAAAGTTGGTGGGAGAAAATGGTATTTTGGAGGCAGTGAGTGCTATTGGAGGGGAAGTTAGAGACCTGAGGGGTGATCCTTTGAAAGGGTTTGAATGGATAGTTTCGGGTCGTCGTAGGAGGCAACTGGGGAGACAGTCACAACATGTGGTGATAATTGCAGGGTCACCAAAGCTGAATGTGTATGATACTGACTTTGGGTGGGGAAGGCCCAAGATGAGTGAAATACTTCATGCTGATGATCCAGGATCCATGTGGCTTTCTGATTGTAGGGACCAAGAACATGGTGGCATTGAAGTTGGGCTAGCATTAAGAGCAATTCAAATGAAGAAATTCAATGCTATTGTGGAAGAGCAACTTAGAGATATTGACATTGTTGTTCCTCACTGA 1455 0.4811 MANEVNHHRTLNIIEQCQVTPPLGSVPATTIPLSFLDLPWLYCAPVKRIFFYHFPHSTHHFLQTALPSLKHSLSLTLQHFFPFAANVAFPPKPHAPHIVYSQGDSVSFTVAESTSDVDNLVSDSPRDVRHVYPFVPTLASPRVLEDGTLLAPSMAVQVTVFDNKGFSVCVTFRHAIADGRAFHHFMKFWASVCGARGDNKASSLEAHLVLPLHDRDMVEDSIGLRPIFLEELWNSPPRIIEPTCPIYDAPSNSDMVRHRIILSCDQVERLKKWVGIKCEGIGLETLHLSTFVVTCSLIWVCKVKSKIVFTDVTDPKDDGCYCLTFLADCRNRSELSVPSTYFGNCLTICHVELQREKLVGENGILEAVSAIGGEVRDLRGDPLKGFEWIVSGRRRRQLGRQSQHVVIIAGSPKLNVYDTDFGWGRPKMSEILHADDPGSMWLSDCRDQEHGGIEVGLALRAIQMKKFNAIVEEQLRDIDIVVPH 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00700 484 Gene3D - 11 239 IPR023213 -
Pumo5g00700 484 Gene3D - 251 479 IPR023213 -
Pumo5g00700 484 PANTHER - 11 476 - -
Pumo5g00700 484 Pfam Transferase family 15 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00700 Pumo-Chr5 13854092 13856320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00700 49 473 Monolignol Biosynthesis Gene Families AT5G48930 23.583 7.22e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00700 - - gmx:100782335 556.984