Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00698 ATGGGCTTCTCTCTGTTACCAAAAGCAACTCCTAGCATTTTGTTCTTGGTCCTGCTGTCTTGTACTTGCTTCACTTCAACAGATGCTTATGATCCGCTTGATCCAAATGGGAATATCACAATCAAATGGGATGTTATATCCTGGACCCCTGATGGATATGTAGCTGTTGTTACTATGAACAACTTCCAAACATTTCGTCACATCCCTTCACCTGGCTGGTCACTAGGATGGACATGGGCCAAAAAGGAGGTAATATGGAACATGATGGGAGGGCAGACCACAGAACAAGGGGATTGTTCAAAATTTAAGGGAAATGTTCCACATTCCTGTAAGAAAAATCCCACAGTTGTAGATTTGCTTCCTGGAACACCTTACAATCAACAAGTTGAAAATTGCTGCAAAGGTGGAGTGCTCAGTACATGGGTGCAGGATCCAACCAAAGCTGCTGCATCATTTCAAGTCAGTGTTGGTAGTGCTGGAACCACAAACAGAACTGTCAAACTCCCAACAAACTTCACCTTGGAAGCACCAGGACCAGGTTATACTTGTGGGCCAGCTAAGATTGTGAGACCAACTAAATTCATTACTCCAGACAAAAGGAGAGTGACCCAAGCACTGATGACATGGAAAGTGGTATGCACATACTCACAATTTCTGGTTGGTAAAAAAGCTCCCACTTGCTGTGTCTCGCTTTCATCTTTCCATAATAATACTATTGTGCCCTGCCCAACATGTTCGTGTGGCTGCCAAAGTAACTCATCTAAGTCAAGGAGATGTGTAAATCCAGGTACACCACATTTGGCCCCAATTGTTACTGGCTCTGGGAAGAATAATTTGTCACCTTTGGTTCAATGTACTAAGCATATGTGCCCAACCCGAGTCCACTGGCACGTTAAGCTTAACTCCAAAAAATACTGGCGTGTGAAGGTTACTATTACTAATTTTAATTACAGGATGAATTATTCTGACTGGAACTTGCTTGTTCAACACCCTAACTTCAACAATCGGACTCAAGTGTTCGGTTTCAACTACAAGTTATTGACTCCTTATGGTTCAATTATAAATGCAGCAATGCTATGGGGAATTAAGTCCCATCATAATGATATTCTCAACCAAGCTGGCCCTAATGGCAATGTTCAAGCAGAGCTACTCTTCCGAAAGGATAAAGCAACTTTTACTTCTGATAAGGGTTCGGCTTTTCCTCGAATGATCTACTTCAATGGTGACAAGTGTGTGATGCCACCATCTAGTGCTTATGCATTTTAG 1266 0.4234 MGFSLLPKATPSILFLVLLSCTCFTSTDAYDPLDPNGNITIKWDVISWTPDGYVAVVTMNNFQTFRHIPSPGWSLGWTWAKKEVIWNMMGGQTTEQGDCSKFKGNVPHSCKKNPTVVDLLPGTPYNQQVENCCKGGVLSTWVQDPTKAAASFQVSVGSAGTTNRTVKLPTNFTLEAPGPGYTCGPAKIVRPTKFITPDKRRVTQALMTWKVVCTYSQFLVGKKAPTCCVSLSSFHNNTIVPCPTCSCGCQSNSSKSRRCVNPGTPHLAPIVTGSGKNNLSPLVQCTKHMCPTRVHWHVKLNSKKYWRVKVTITNFNYRMNYSDWNLLVQHPNFNNRTQVFGFNYKLLTPYGSIINAAMLWGIKSHHNDILNQAGPNGNVQAELLFRKDKATFTSDKGSAFPRMIYFNGDKCVMPPSSAYAF 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00698 421 PANTHER PROTEIN COBRA 18 420 IPR006918 GO:0010215|GO:0016020
Pumo5g00698 421 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0016020
Pumo5g00698 421 PIRSF COBRA 3 421 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00698 Pumo-Chr5 13843385 13846470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00698 1 419 COBRA Gene Family AT3G02210 67.371 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00698 - - gmx:112997606 790.801