Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00693 ATGGACACAACTGGCACACGAATTGCTTTAGGAACCATCCTCATCTTGCTGTGCCTCCCTTACCTTTCCGTAGCAGATGTTATTTATCATGCCAATGACCTCTTCAGCATCCACTGTGGCTCATCCGCCAACTTTTCCACGCCCGACGGTCGGAATTGGACTGGAGACATCCCATTCCTCACAGCTGAAAGCCTCGACTCGGTTGTTGCTCCTGCACTCACACCATCTACCCAAGAGGGTCCTTATACCTATGCTCGTCTCTCTCAGTCCTATTTCACTTACTCATTCCCTGTCACCCCAGGCACCCCAAAGTTCATTCGCCTCTTCTTCTACGCAACTTCATACCAAAACTTTGATCGCTCCAAAGCCTATTTCTCAGTCAAAGCTGGCCCATACACCCTCCTTCACCATTTCAACGCTTCCCTCAATGCTGATGCTAACGCTGTTGACGACCCTGGCCTCCCCGACATCTTGATGAGAGAGTATTGCATCAACCTCCAAGATGGTCAAAAAAAGCTCAACATAACCTTCATTCCAAGCACCGCAGATTCGTACGCTTTCATCAATGGAATCGAGATTGTTTCCATGCCCCCTTATCTCTACTACACCAATCCTGACGACTACACTGGACAGCCGCAACTTGTTGGCACCACCACATCCTCGTATCCTATTGAAAACAAGTCAGCTCTGGAGACAATGTACCGGTTAAACGCTGGAGGACAAACAATCCCCTCCTCAGAGGACACAGGTATGCTCAGGACTTGGGATGCCGATGACAACTACCTAACTACTCAAAGTGAACAATCTGTTGAGTTTGCGCATAATACTAAGCTGAGCTTCACTATGACTCCTAACTACACGGCACCAGACAAAGTGTACCGAACCGTAAGGAATATGGGAAGGGATGCCTCTATCAACATGAGGTTCAACCTCACGTGGAAGTTCCCCGTTGATTCTGGCTTCACCTACTTGCTAAGGTTACACTTTTGTGAGCTTAACCCCAGAGTTGAGGAGCCTGGTGACCTGAGATTCTACATCTTCATTCAGGATCAGTTAGTTACCGATTCAGCAGACGTTCTCTATTGGACCAGAAAGAAGGGTGTACCCGTGGTTAAAAACTACGTAGTTATGATCCCAGAGAATCCGAAAAAAGCTAACCTTTCACTGAAAATGCATCCTCACCCTAAAAGCTCGATCCCAGACGAACAAGTAAACGCAATTGAAATCTTCAAAATCAGCAATGCTACAGATAGTCTCGCTGGACAAAACCCAGACCCTCCACCTTCACAAACCCCCGTGGTTCCCCATCAAAGCTCAAACAAGAAAAACAGCGGCTCCAAGAAAACCCTTGCCGCCGTGGCAGGTGCCGTTTCCGGCGTCGTTTTGCTCTCCTTTATTGTCGCTTTCTTCCTCATCAAACGCAAGAAGAACGTTGCCGTTGACGAGGGTTCCAACCAAAAAGTCGGAACTTCTCGCGGGGGTGGCTCATCATCGCTACCAACCAACCTCTGCCGCCACTTTTCAATCGCAGAAATCAGAGCCGCCACCAACAACTTTGACGAACTCTTCGTGGTTGGCGTCGGAGGCTTTGGCAACGTGTACAAAGGCTATATCGACGATGGTTCAACATGTGTCGCAGTCAAAAGGCTCAAACCGGGTTCTCAGCAAGGTGAGCAGGAGTTCATGAATGAGATTGAAATGCTCTCTCAACTTCGTCATCTACATCTCGTTTCCCTTATCGGTTACTGTTACGAGAGCAACGAGATGATACTAGTTTACGATTTCATGGATCGCGGAACCCTCCGTGACCATCTTTACGGCACCGATAACCCTTCGCTCTCATGGAAGCAAAGGCTTCAGATCTGCATAGGTGCTGCACGGGGACTGCATTATCTGCATACAGGTGCGAAGCACATGATCATTCACCGCGACGTGAAGAGCACCAACATATTATTGGATGAAAAATGGGTGGCCAAAGTTTCAGACTTCGGGTTATCCCGAATTGGACCCACGGGTTCTTCAATGACCCATGTTAGCACTCAGGTGAAAGGCAGTGTTGGATATTTAGACCCGGAGTACTATAAACGACAGCGTTTAACCGAGAAGTCTGACGTGTACTCCTTTGGGGTGGTGCTGTTAGAGGTATTGTCTGGGAGACAGCCTTTGCTCCGTACGGTGGAGAAGCAACAGGTGTCACTGGTTGATTGGGCGAAGCATCTCTATCACAAGGGTTCTCTGGGTGCGATTGTGGATCCAACACTGAAGGGCCAGATAGCACCCCACTGTTTGCACAGATTTGGTGAGGTTGCACTGAGCTGTTTGCTTGAGGATGGGACCCAGCGACCTTCCATGAACGACGTCGTTGGGGTGTTGGAGTTTGTTCTGCAGCTTCAAGATAGTGCTGTTAATGGAGCGGTACCTTTGGTGATGAGTGGTGGGGATTATGAAGATAGTGAGGACATGTTTAGCAGTACCCATAGTGGTATACAACTTTCGGATTATAGTAACAGCACTGGATTGAACACCACAAGCCATAGGAGTACGGAATCTGACAGGTTGATCCCGGAGAATGTTTTCTCTGAGATTAAGGATCCAAAGGGACGATGA 2607 0.4845 MDTTGTRIALGTILILLCLPYLSVADVIYHANDLFSIHCGSSANFSTPDGRNWTGDIPFLTAESLDSVVAPALTPSTQEGPYTYARLSQSYFTYSFPVTPGTPKFIRLFFYATSYQNFDRSKAYFSVKAGPYTLLHHFNASLNADANAVDDPGLPDILMREYCINLQDGQKKLNITFIPSTADSYAFINGIEIVSMPPYLYYTNPDDYTGQPQLVGTTTSSYPIENKSALETMYRLNAGGQTIPSSEDTGMLRTWDADDNYLTTQSEQSVEFAHNTKLSFTMTPNYTAPDKVYRTVRNMGRDASINMRFNLTWKFPVDSGFTYLLRLHFCELNPRVEEPGDLRFYIFIQDQLVTDSADVLYWTRKKGVPVVKNYVVMIPENPKKANLSLKMHPHPKSSIPDEQVNAIEIFKISNATDSLAGQNPDPPPSQTPVVPHQSSNKKNSGSKKTLAAVAGAVSGVVLLSFIVAFFLIKRKKNVAVDEGSNQKVGTSRGGGSSSLPTNLCRHFSIAEIRAATNNFDELFVVGVGGFGNVYKGYIDDGSTCVAVKRLKPGSQQGEQEFMNEIEMLSQLRHLHLVSLIGYCYESNEMILVYDFMDRGTLRDHLYGTDNPSLSWKQRLQICIGAARGLHYLHTGAKHMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPTGSSMTHVSTQVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLSGRQPLLRTVEKQQVSLVDWAKHLYHKGSLGAIVDPTLKGQIAPHCLHRFGEVALSCLLEDGTQRPSMNDVVGVLEFVLQLQDSAVNGAVPLVMSGGDYEDSEDMFSSTHSGIQLSDYSNSTGLNTTSHRSTESDRLIPENVFSEIKDPKGR 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00693 868 CDD STKc_IRAK 534 792 - -
Pumo5g00693 868 Gene3D - 228 414 - -
Pumo5g00693 868 Gene3D - 32 196 - -
Pumo5g00693 868 MobiDBLite consensus disorder prediction 833 848 - -
Pumo5g00693 868 MobiDBLite consensus disorder prediction 833 853 - -
Pumo5g00693 868 FunFam receptor-like protein kinase FERONIA 482 595 - -
Pumo5g00693 868 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Pumo5g00693 868 FunFam Receptor-like protein kinase FERONIA 596 807 - -
Pumo5g00693 868 Pfam Malectin-like domain 37 412 IPR024788 -
Pumo5g00693 868 ProSiteProfiles Protein kinase domain profile. 519 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00693 868 FunFam FERONIA receptor-like kinase 228 413 - -
Pumo5g00693 868 ProSitePatterns Protein kinases ATP-binding region signature. 525 548 IPR017441 GO:0005524
Pumo5g00693 868 Pfam Protein tyrosine and serine/threonine kinase 525 789 IPR001245 GO:0004672|GO:0006468
Pumo5g00693 868 SMART serkin_6 519 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo5g00693 868 Gene3D Phosphorylase Kinase; domain 1 483 595 - -
Pumo5g00693 868 PANTHER OS03G0124300 PROTEIN-RELATED 13 478 IPR046957 GO:0004672
Pumo5g00693 868 FunFam FERONIA receptor-like kinase 34 197 - -
Pumo5g00693 868 MobiDBLite consensus disorder prediction 418 446 - -
Pumo5g00693 868 Gene3D Transferase(Phosphotransferase) domain 1 596 805 - -
Pumo5g00693 868 SUPERFAMILY Protein kinase-like (PK-like) 496 794 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00693 Pumo-Chr5 13577036 13580088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00693 22 868 Receptor kinase-like Gene Family AT3G51550 48.655 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo5g00693 Malectin_like 6.4e-41 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00693 - - gmx:100305394 1320.06