Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00686 ATGGCTCACACAGTGAAGGTGATAGAACAGTGTGAAGTGAGTCCTCCACCAGGTTCGGTTCCTTCAACCTCTATCCCTCTCACTTTCTTTGATCTTCCATGGCTATGTTGCCCCCCACTCAAACGTATTTTCTTCTATGAATTCCCTTATTCCACCCAACACTTCTTCCAAACTCTCCTTCCAAATCTCAAGCACTCTCTTTCCCTCACTCTCCAACACTTCTTCCCTTTCTCTTCCAACCTTGTCTTCCCTCCAAAACCAAACACCCCTCACATCCTCTACACACAAGCAGATTCTATCTCCTTCACCGTAGCAGAGTCCACAGCAGATTTCACCACCCTTGTCTCTGATTCCCCAAAAGATGTTACCCTTTTGCACCCTTTTGTTCCCGTGTTGCCTCCACCACGTATCTTAGAAGATGGCACGTTTCTTATCCCTCTCATGGCCATTCAGGTCACTGTTATGTCCCACTCTGGCTTCACCATATGCTTCACTTTCAGACACGTGGCTGCAGATGGGAGAGCTTTTCATCACTTCATGAAATTCTGGGCCTCTATTTGTAAGTCCAAAGGAGACTTGGGCTTGGTTTCCCTTGAAGGCTCTCTTGCTCTGCCATTGCACAATAGGGACATCATTCAAGACCCCAAAGGCCTTAAGCCCATTTTCTTAGAAGAATTGTGGAATTTGTTACCGGAAAATGTAGAGTCCAAGGGTAAAATACGTGATGTTCCTAGTGACATGGTGCGTCACATGTTTGTCTTGAGCCATGACCATGTTGAGAAACTCAAGAAATGGGTCACTATTAAATGCAAAAGCCATGGTCTAGCAATACCACACTTAACAACCTTTGTGGTAACATGTTCTTTGATTTGGGTTTGTAAGGTGAAATCAGAAGAAGTTGATACAATACTTCCGAATAATGATGATTCCTACGTCTTGGCCTTTATGGCAGATTGTCGTAATCTTCCGGAATGTTCAATTCCATTGGAATATTTTGGCAATTGTTTGGTTTGTGGCAATGCTGAAGTCAAGAGGAGCAAGCTTGTTGGAGAAAATGGTATTTTGGAGGCAGCCATTGCTATTGGTAGTGAAGTTAGACATTTGCAACGTGAAACTTTTGAAGGGGCTGAAACATTGATGTCAAATTTTACAGAATTTGCCACGGTGGGGAAGCATATGACAATACTTGCAGGCTCACCAAATCTGGAAGTGTATGAAACTGACTTTGGGTGGGGAAAGCCCAAGAGGAGTGAAGTAGTTCATGTAGATAATTCAGGAACAATCTCCCTTTCTGACTGTAGAGACAAAGAAGGTCGAATTGAAGTTGGGATAGCACTTCAAAAGATTCAAATGAATAAATTCAGTTCCATTTTGGAAGAACACCTTACAGAAATTGCAGTTCTTGACTGA 1410 0.4305 MAHTVKVIEQCEVSPPPGSVPSTSIPLTFFDLPWLCCPPLKRIFFYEFPYSTQHFFQTLLPNLKHSLSLTLQHFFPFSSNLVFPPKPNTPHILYTQADSISFTVAESTADFTTLVSDSPKDVTLLHPFVPVLPPPRILEDGTFLIPLMAIQVTVMSHSGFTICFTFRHVAADGRAFHHFMKFWASICKSKGDLGLVSLEGSLALPLHNRDIIQDPKGLKPIFLEELWNLLPENVESKGKIRDVPSDMVRHMFVLSHDHVEKLKKWVTIKCKSHGLAIPHLTTFVVTCSLIWVCKVKSEEVDTILPNNDDSYVLAFMADCRNLPECSIPLEYFGNCLVCGNAEVKRSKLVGENGILEAAIAIGSEVRHLQRETFEGAETLMSNFTEFATVGKHMTILAGSPNLEVYETDFGWGKPKRSEVVHVDNSGTISLSDCRDKEGRIEVGIALQKIQMNKFSSILEEHLTEIAVLD 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00686 469 Gene3D - 243 464 IPR023213 -
Pumo5g00686 469 Gene3D - 4 237 IPR023213 -
Pumo5g00686 469 Pfam Transferase family 17 459 - -
Pumo5g00686 469 PANTHER - 5 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00686 Pumo-Chr5 13379024 13380831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00686 43 460 Monolignol Biosynthesis Gene Families AT5G48930 21.247 1.48e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00686 - - gmx:100782335 855.899