Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00684 ATGGAGCTCACGCATTTCTGCCAGAAGATCATAGCTCTATTAGGGAATGTGAAGCAAATGAAGAGGTATCTTCTGAAGAACTGTGCAACACAACAACAGAAGAATCAGTCAAGACAACTGAAGAATGCGATGCCGTGGGAGTCAATCAATATTTCAAATGGAAAAGTTCAGAGTGAACTGAAGCCACCAAGAGTTCTTGAGGCTTTGTCTGCTTCTGGGTTAAGGGCTCTTAGATATGCTCGTGAAATAGAAGGAATTGGACAAGTTGTTGCTCTGGACAATGACGAAGCTTCTGTGGAGGCATGCAGAAGGAACATCAAATTCAATGGTTCAGTTGCCAGTTCAAAAGTGGAGTCTCATCTTGCGGATGCTCGTGTATATATGTTAACCCACCCAAAAGAATTTGATGTGGTTGATCTTGATCCTTATGGTTCACCCTCAGTGTTTCTGGATTCAGCAGTTCAATCTGTTGTTGATGGAGGCATGCTGATGTGTACTGCAACAGATATGGCTGTACTCTGTGGGGGAAATGGGGAGGTCTGCTATTCAAAATATGGATCAATTCCACTGAGAGGAAAATATTGCCATGAAATGGCTTTAAGAATCCTTCTGGCTTCCATTGAGAGTCATGCTAATCGTTACAAGCGATATATTGTTCCTGTGCTATCTGTTCAGATGGATTTTTATGTTCGTGTTTTTGTTCGCATATACACTTCTGCAAGTGCAATGAAAAACACTCCCCTAAAGCTTTCATATGTTTATCAGTGCACTGGGTGTGATGCTTTCCACCTACAGCCCATTGGGAGGAGCATTTCCAAGAATAATAGTGTCAAATATCTGCCTGGCTATGGTCCTGTTGTTCCTCAAGAATGCAATTATTGTGGGAAGAAATTCAATATGGGTGGACCTATATGGTCTGCTCCTATCCATGATCAAGAATGA 942 0.4193 MELTHFCQKIIALLGNVKQMKRYLLKNCATQQQKNQSRQLKNAMPWESINISNGKVQSELKPPRVLEALSASGLRALRYAREIEGIGQVVALDNDEASVEACRRNIKFNGSVASSKVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQSVVDGGMLMCTATDMAVLCGGNGEVCYSKYGSIPLRGKYCHEMALRILLASIESHANRYKRYIVPVLSVQMDFYVRVFVRIYTSASAMKNTPLKLSYVYQCTGCDAFHLQPIGRSISKNNSVKYLPGYGPVVPQECNYCGKKFNMGGPIWSAPIHDQE 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00684 313 ProSiteProfiles Trm1 methyltransferase domain profile. 1 313 IPR002905 GO:0003723|GO:0004809|GO:0008033
Pumo5g00684 313 Pfam N2,N2-dimethylguanosine tRNA methyltransferase 59 313 IPR002905 GO:0003723|GO:0004809|GO:0008033
Pumo5g00684 313 Gene3D Vaccinia Virus protein VP39 15 313 IPR029063 -
Pumo5g00684 313 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 60 313 IPR029063 -
Pumo5g00684 313 FunFam tRNA (guanine(26)-N(2))-dimethyltransferase 28 313 - -
Pumo5g00684 313 PANTHER N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE 26 313 IPR002905 GO:0003723|GO:0004809|GO:0008033
Pumo5g00684 313 CDD AdoMet_MTases 64 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00684 Pumo-Chr5 13337599 13341917 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pumo5g00684 TRM 3.6e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00684 K00555 - gmx:100800256 502.286