Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo5g00684 | ATGGAGCTCACGCATTTCTGCCAGAAGATCATAGCTCTATTAGGGAATGTGAAGCAAATGAAGAGGTATCTTCTGAAGAACTGTGCAACACAACAACAGAAGAATCAGTCAAGACAACTGAAGAATGCGATGCCGTGGGAGTCAATCAATATTTCAAATGGAAAAGTTCAGAGTGAACTGAAGCCACCAAGAGTTCTTGAGGCTTTGTCTGCTTCTGGGTTAAGGGCTCTTAGATATGCTCGTGAAATAGAAGGAATTGGACAAGTTGTTGCTCTGGACAATGACGAAGCTTCTGTGGAGGCATGCAGAAGGAACATCAAATTCAATGGTTCAGTTGCCAGTTCAAAAGTGGAGTCTCATCTTGCGGATGCTCGTGTATATATGTTAACCCACCCAAAAGAATTTGATGTGGTTGATCTTGATCCTTATGGTTCACCCTCAGTGTTTCTGGATTCAGCAGTTCAATCTGTTGTTGATGGAGGCATGCTGATGTGTACTGCAACAGATATGGCTGTACTCTGTGGGGGAAATGGGGAGGTCTGCTATTCAAAATATGGATCAATTCCACTGAGAGGAAAATATTGCCATGAAATGGCTTTAAGAATCCTTCTGGCTTCCATTGAGAGTCATGCTAATCGTTACAAGCGATATATTGTTCCTGTGCTATCTGTTCAGATGGATTTTTATGTTCGTGTTTTTGTTCGCATATACACTTCTGCAAGTGCAATGAAAAACACTCCCCTAAAGCTTTCATATGTTTATCAGTGCACTGGGTGTGATGCTTTCCACCTACAGCCCATTGGGAGGAGCATTTCCAAGAATAATAGTGTCAAATATCTGCCTGGCTATGGTCCTGTTGTTCCTCAAGAATGCAATTATTGTGGGAAGAAATTCAATATGGGTGGACCTATATGGTCTGCTCCTATCCATGATCAAGAATGA | 942 | 0.4193 | MELTHFCQKIIALLGNVKQMKRYLLKNCATQQQKNQSRQLKNAMPWESINISNGKVQSELKPPRVLEALSASGLRALRYAREIEGIGQVVALDNDEASVEACRRNIKFNGSVASSKVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAVQSVVDGGMLMCTATDMAVLCGGNGEVCYSKYGSIPLRGKYCHEMALRILLASIESHANRYKRYIVPVLSVQMDFYVRVFVRIYTSASAMKNTPLKLSYVYQCTGCDAFHLQPIGRSISKNNSVKYLPGYGPVVPQECNYCGKKFNMGGPIWSAPIHDQE | 313 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo5g00684 | 313 | ProSiteProfiles | Trm1 methyltransferase domain profile. | 1 | 313 | IPR002905 | GO:0003723|GO:0004809|GO:0008033 | |
Pumo5g00684 | 313 | Pfam | N2,N2-dimethylguanosine tRNA methyltransferase | 59 | 313 | IPR002905 | GO:0003723|GO:0004809|GO:0008033 | |
Pumo5g00684 | 313 | Gene3D | Vaccinia Virus protein VP39 | 15 | 313 | IPR029063 | - | |
Pumo5g00684 | 313 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 60 | 313 | IPR029063 | - | |
Pumo5g00684 | 313 | FunFam | tRNA (guanine(26)-N(2))-dimethyltransferase | 28 | 313 | - | - | |
Pumo5g00684 | 313 | PANTHER | N 2 ,N 2 -DIMETHYLGUANOSINE TRNA METHYLTRANSFERASE | 26 | 313 | IPR002905 | GO:0003723|GO:0004809|GO:0008033 | |
Pumo5g00684 | 313 | CDD | AdoMet_MTases | 64 | 166 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo5g00684 | Pumo-Chr5 | 13337599 | 13341917 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Pumo5g00684 | TRM | 3.6e-84 | CL0063 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo5g00684 | K00555 | - | gmx:100800256 | 502.286 |