Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo5g00645 ATGACGATTAGTAGTATTGCACCTAAGGCGGAGAAGAAGAAATCAAGGAAGAACAAGGCAGTTGTTAATGAGAATGCACCCTTGTTGCCAAAAAGTCATGTTCAGGAGAGTGATGCTGGGTTTGATGATTTCAATGGAGCTTCATTTTCTGGGGCTGTTTTTAACTTGTCCACCACAATTATTGGTGCTGGCATCATGGCCTTGCCTGCAACCTTGAAACAGTTGGGGATGATACCCGGTCTTCTTGCCATCATCTTCATGGCTTTGTTGACAGAGAAGTCAATTGAGCTTTTGATTAGGTTTACCCGGGCAGGGAAGTCTGTTTCTTATGCTGGTCTCATGGGGGATTCCTTTGGGAAGTATGGAAAAGCTCTGGTGCAGATATGTGTTATAGTCAATAACATTGGTGTGCTGATTGTTTACATGATTATAATTGGTGATGTGCTCTCTGGAACATCTTCAAGTGGAGATCATCACTATGGTATCCTTGAAGGATGGTTTGGTGTGCACTGGTGGACGGGGCGGACATTTGTTGTCCTTTTTACAACATTTGCGATATTTGCACCCCTGGCAAGCTTTAAGCGAATTGATTCATTGAGATTCACATCCGCCCTTTCAGTCGCACTAGCAGTTGTTTTTCTAGTCATTGCTGTGGGAATTGCAGTTGTCAAGATAATAAGTGGAGGCATTGTGATGCCCAGACTCTTCCCGGTCACTACTGATGTGGCATCATTCTTTAAACTATTCACTGTAGTTCCTGTGTTTGTGACTGCCTACATCTGCCACTACAATGTTCACAGCATAGACAATGAACTTGAGGACTCCTCACAGATGCGAGGGGTTGTGCAAACTGCCCTTCTTCTATGCTCTTCAGTGTATGTAATGATAAGCTTCTTTGGGTTCCTCCTATTTGGCGAAGGAACTCTTGATGACGTGCTGGCCAATTTCGATACCGACCTTGGAATTCCTTTTGGTTCGGTGCTCAATGATGCTGTTCGTATAAGCTACGCTGCACACCTGATGCTTGTATTTCCAGTTGTCTTCTATCCGTTGCGGCTCAATATAGATGGTCTCCTCTTCTCTTCATCAAGGCCTCTGGTTCTGGATAACTTCAGATTTGCATCACTTACTATTTCCCTTATTGGTATTATCTTCCTGGGAGCAAATTTCATACCTAGCATTTGGGATGCTTTCCAGTTTACGGGAGCAACTGCCGCAGTCTGTATAGGATTCATTTTTCCAGCTGCCATCACTCTTAGGGACCGCTACAACATTGCAACTAAATCAGACAAGATTTTGTCTGTTGTTATGATAATCCTGGCAGTCTTCTCAAACGTTGTGGCTATATACAGTGATGCCTATGCCTTGATCAAGCAGAACAAAACTTCACGCGAATGA 1398 0.4371 MTISSIAPKAEKKKSRKNKAVVNENAPLLPKSHVQESDAGFDDFNGASFSGAVFNLSTTIIGAGIMALPATLKQLGMIPGLLAIIFMALLTEKSIELLIRFTRAGKSVSYAGLMGDSFGKYGKALVQICVIVNNIGVLIVYMIIIGDVLSGTSSSGDHHYGILEGWFGVHWWTGRTFVVLFTTFAIFAPLASFKRIDSLRFTSALSVALAVVFLVIAVGIAVVKIISGGIVMPRLFPVTTDVASFFKLFTVVPVFVTAYICHYNVHSIDNELEDSSQMRGVVQTALLLCSSVYVMISFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRISYAAHLMLVFPVVFYPLRLNIDGLLFSSSRPLVLDNFRFASLTISLIGIIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLRDRYNIATKSDKILSVVMIILAVFSNVVAIYSDAYALIKQNKTSRE 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo5g00645 465 MobiDBLite consensus disorder prediction 1 21 - -
Pumo5g00645 465 PANTHER AMINO ACID TRANSPORTER 45 444 - -
Pumo5g00645 465 Pfam Transmembrane amino acid transporter protein 47 451 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo5g00645 Pumo-Chr5 12492617 12495995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo5g00645 16 465 Amino Acid or Auxin Permease AAAP Family AT3G30390 68.805 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo5g00645 K14207 - gmx:100796345 827.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo5g00645 5 12492617 12495995 Pumo5g00645 5 12492617 12495995 ECH